RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CSTF1Q05048 431 aaKnown RBP18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 LCTLQ6UWM7 567 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 LINC01555Q8NAE3 123 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 NEIL3Q8TAT5 605 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 RNF170Q96K19 258 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 FERD3LQ96RJ6 166 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 FAM83CQ9BQN1 747 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 AICDAQ9GZX7 198 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 GALNT9Q9HCQ5 603 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 A0A1W2PRQ8 180 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 OTOL1A6NHN0 477 aaPredicted RBP18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 YES1P07947 543 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 DDX5P17844 614 aaKnown RBP18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 TRHRP34981 398 aaPredicted RBP18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 STXBP1P61764 594 aaKnown RBP18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 ZNF311Q5JNZ3 666 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 FAM46CQ5VWP2 391 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 HSDL2Q6YN16 418 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 SIMC1Q8NDZ2 872 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 RGMAQ96B86 450 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 MSLNLQ96KJ4 702 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 KCNK6Q9Y257 313 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 GSTK1Q9Y2Q3 226 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 PLEKHM1Q9Y4G2 1056 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 ATG4BQ9Y4P1 393 aa18.4■□□□□ 0.54
CNEP1R1-203ENST00000458059 SOCS6O14544 535 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 TRIM23P36406 574 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 HTR2BP41595 481 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 SLC16A1P53985 500 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 GAS1P54826 345 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 GPLD1P80108 840 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 EFR3AQ14156 821 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 LTB4RQ15722 352 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 SENP5Q96HI0 755 aaPredicted RBP18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 FUZQ9BT04 418 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 SLC35C2Q9NQQ7 365 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 NDOR1Q9UHB4 597 aa18.39■□□□□ 0.54
CNEP1R1-203ENST00000458059 OR52A4PA6NMU1 304 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 PRODHO43272 600 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 PLOD3O60568 738 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 FCMRO60667 390 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 ACP2P11117 423 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 SMIM11AP58511 58 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 ZNF77Q15935 545 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 WSCD2Q2TBF2 565 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 ARHGAP15Q53QZ3 475 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 FAM27D1Q5T7N8 215 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 SLC36A4Q6YBV0 504 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 TMEM145Q8NBT3 493 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 FBXO15Q8NCQ5 510 aaPredicted RBP18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR51G2Q8NGK0 314 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 TMEM163Q8TC26 289 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 SPRYD4Q8WW59 207 aaPredicted RBP18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 UPRTQ96BW1 309 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 FCRL4Q96PJ5 515 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 HDHD2Q9H0R4 259 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 IRF2BPLQ9H1B7 796 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 MCUBQ9NWR8 336 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 SF3B6Q9Y3B4 125 aaKnown RBP18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 CHD9Q3L8U1 2897 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 TSPAN11A1L157 253 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 NARSO43776 548 aaKnown RBP18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 CEBPBP17676 345 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 MC3RP41968 323 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 CDK5Q00535 292 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 KLHL22Q53GT1 634 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 IDNKQ5T6J7 187 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR4C11Q6IEV9 310 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 RDH10Q8IZV5 341 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 SETD7Q8WTS6 366 aaKnown RBP18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 CAPNS2Q96L46 248 aa18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 SECISBP2Q96T21 854 aaKnown RBP18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 ISG20L2Q9H9L3 353 aaKnown RBP18.39■□□□□ 0.53
CNEP1R1-203ENST00000458059 SPTBP11277 2137 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 PCDH8O95206 1070 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 FGBP02675 491 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 EPCAMP16422 314 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 SLC1A3P43003 542 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 MAPK9P45984 424 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 FCRLBQ6BAA4 426 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 FAM92BQ6ZTR7 304 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 NRMQ8IXM6 262 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 CLDN22Q8N7P3 220 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR4Q3Q8NH05 313 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 CNRIP1Q96F85 164 aaPredicted RBP18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 DHRS1Q96LJ7 313 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 C12orf66Q96MD2 445 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 DDX31Q9H8H2 851 aaKnown RBP18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 ACAD8Q9UKU7 415 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 IGLON5A6NGN9 336 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 UBXN7O94888 489 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 CERS1P27544 350 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 CAMK1Q14012 370 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 C1orf94Q6P1W5 598 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 SLC39A5Q6ZMH5 540 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 QSOX2Q6ZRP7 698 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 NRSN1Q8IZ57 195 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 GDPD1Q8N9F7 314 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR9A2Q8NGT5 310 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 PRRC1Q96M27 445 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms