RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 P3H1Q32P28 736 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CHRFAM7AQ494W8 412 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 SLC22A10Q63ZE4 541 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 DARS2Q6PI48 645 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 OPN5Q6U736 354 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 SASS6Q6UVJ0 657 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 LCTLQ6UWM7 567 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 HSDL2Q6YN16 418 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CLEC17AQ6ZS10 378 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CTAGE6Q86UF2 777 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CCDC50Q8IVM0 306 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PM20D2Q8IYS1 436 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CA13Q8N1Q1 262 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 RASGEF1CQ8N431 466 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 FAM71DQ8N9W8 422 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 C9orf106Q8NAJ2 232 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 MAPK1IP1LQ8NDC0 245 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 OR8K1Q8NGG5 319 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 NT5CQ8TCD5 201 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 ZPLD1Q8TCW7 415 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PTPMT1Q8WUK0 201 aaPredicted RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 DDB2Q92466 427 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 HSPBAP1Q96EW2 488 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 WDYHV1Q96HA8 205 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 MRGPRX4Q96LA9 322 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 WFIKKN1Q96NZ8 548 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CCL19Q99731 98 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 FAM118BQ9BPY3 351 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CCDC77Q9BR77 488 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 C19orf24Q9BVV8 132 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 RBM24Q9BX46 236 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 OSBPL8Q9BZF1 889 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 AICDAQ9GZX7 198 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PCBD2Q9H0N5 130 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 UBQLN3Q9H347 655 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 GOLPH3Q9H4A6 298 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CCDC177Q9NQR7 707 aaPredicted RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 CHRAC1Q9NRG0 131 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 ZNHIT6Q9NWK9 470 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 TMEM160Q9NX00 188 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 C6orf203Q9P0P8 240 aaPredicted RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 FETUBQ9UGM5 382 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 NDRG3Q9UGV2 375 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 ANAPC5Q9UJX4 755 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 SLC45A2Q9UMX9 530 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PCDHA13Q9Y5I0 950 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.34□□□□□ -1.873e-18■■■□□ 18.2
RBM39-220ENST00000455343 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 PHF3Q92576 2039 aaKnown RBP3.34□□□□□ -1.88
RBM39-220ENST00000455343 ZNF407Q9C0G0 2248 aa3.34□□□□□ -1.88
RBM39-220ENST00000455343 ARID1AO14497 2285 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 SCN2AQ99250 2005 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 A0A096LNT2 108 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 TRBC2A0A5B9 178 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 SYNDIG1LA6NDD5 238 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 LRRC14BA6NHZ5 514 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 SMTNL1A8MU46 457 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 A8MV72 311 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 VWC2LB2RUY7 222 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 C4orf51C9J302 202 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 PSMD12O00232 456 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 EIF3FO00303 357 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 NDUFS4O43181 175 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 SPRY1O43609 319 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 CEP104O60308 925 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 TRIM3O75382 744 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 NDUFS3O75489 264 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 TNFSF13O75888 250 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 IGKV3-11P04433 115 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 HPNP05981 417 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 MPC1LP0DKB6 136 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 RNH1P13489 461 aaKnown RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 ENO3P13929 434 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 CPN1P15169 458 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 FMO4P31512 558 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 STIP1P31948 543 aaKnown RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 CCKARP32238 428 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 CTNNA1P35221 906 aaKnown RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 AHRP35869 848 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 HNRNPFP52597 415 aaKnown RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 NR1H2P55055 460 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 RAB8AP61006 207 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 EEF1A1P68104 462 aaKnown RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 POU6F2P78424 691 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 FAM27E3Q08E93 113 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 RUNX2Q13950 521 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 ETFDHQ16134 617 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 CLEC12BQ2HXU8 276 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 PIGGQ5H8A4 983 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 PCID2Q5JVF3 399 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 C10orf62Q5T681 223 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 RNF187Q5TA31 235 aaPredicted RBP3.33□□□□□ -1.88
RBM39-220ENST00000455343 THEMIS2Q5TEJ8 643 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 EEF1A1P5Q5VTE0 462 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 AGTRAPQ6RW13 159 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 SH2D5Q6ZV89 423 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 PLEKHM3Q6ZWE6 761 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 CENPUQ71F23 418 aa3.33□□□□□ -1.88
RBM39-220ENST00000455343 C17orf64Q86WR6 236 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms