RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 PRKRAO75569 313 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 TP53P04637 393 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 ACP2P11117 423 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 PIPP12273 146 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 GABRA5P31644 462 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 VIPR1P32241 457 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 GCGRP47871 477 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 LGALS3BPQ08380 585 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 PIP5KL1Q5T9C9 394 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 ZDHHC20Q5W0Z9 365 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 CCSAPQ6IQ19 270 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 SYT9Q86SS6 491 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 RASGEF1AQ8N9B8 481 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 TRMT10AQ8TBZ6 339 aaKnown RBP13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 OR5P2Q8WZ92 322 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 OR10A4Q9H209 315 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 SPNS1Q9H2V7 528 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 L7N2F9 121 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 C4BPBP20851 252 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 GSTM3P21266 225 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 PYCR1P32322 319 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 EVX1P49640 407 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 ESPNLQ6ZVH7 1005 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 NRMQ8IXM6 262 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 TMEM163Q8TC26 289 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 GLYATL1Q969I3 302 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 WDFY2Q96P53 400 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 ARPC5LQ9BPX5 153 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 IFT27Q9BW83 186 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 PLA2G12AQ9BZM1 189 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 TMEM38AQ9H6F2 299 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 SH2B3Q9UQQ2 575 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 ZC3H12DA2A288 527 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 LEUTXA8MZ59 168 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 SLC19A2O60779 497 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 NTN1O95631 604 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 NDUFA9Q16795 377 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 TOR1AIP1Q5JTV8 583 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 IQCF2Q8IXL9 164 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 RPLP0P6Q8NHW5 317 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 ADAMTS15Q8TE58 950 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 TAPBPLQ9BX59 468 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 ZNF69Q9UC07 566 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 SOCS6O14544 535 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 ZDHHC11BP0C7U3 371 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 CPEP16870 476 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 PITPNBP48739 271 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 TLE2Q04725 743 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 TGM3Q08188 693 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 RAB40BQ12829 278 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 TECPR1Q7Z6L1 1165 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 GPR135Q8IZ08 494 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 CYB561A3Q8NBI2 242 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 GPR32P1Q8NGA4 272 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 ARSGQ96EG1 525 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 METTL17Q9H7H0 456 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 NEUROD4Q9HD90 331 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 SLAMF7Q9NQ25 335 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 RABL2BQ9UNT1 228 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 FXYD6-FXYD2A0A087WZ82 144 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 SLC9A3R1O14745 358 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 EFCAB14O75071 495 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 ALDOBP05062 364 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 CLDN20P56880 219 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 BPHLQ86WA6 291 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 CDK20Q8IZL9 346 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 SMAP2Q8WU79 429 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 SAMD8Q96LT4 415 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 MRPL9Q9BYD2 267 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 FXYD6Q9H0Q3 95 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 TAAR2Q9P1P5 351 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 TMEM5Q9Y2B1 443 aa13.07□□□□□ -0.32
UBE2D3-210ENST00000453744 GTPBP1O00178 669 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 CA12O43570 354 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 SLC2A10O95528 541 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 PLATP00750 562 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 PRKACAP17612 351 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 SLC6A11P48066 632 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 ZBTB37Q5TC79 503 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 OR51L1Q8NGJ5 315 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 ATP6V1G2-DDX39BF2Z307 99 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 OC90Q02509 493 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 PRKCZQ05513 592 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 ZNF783Q6ZMS7 281 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 PRSS45Q7RTY3 260 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 NPAS4Q8IUM7 802 aa13.06□□□□□ -0.32
UBE2D3-210ENST00000453744 ACBD7Q8N6N7 88 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms