RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 SASS6Q6UVJ0 657 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 ATRAIDQ6UW56 229 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 TMEM184AQ6ZMB5 413 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 RGS9BPQ6ZS82 235 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 SH2D5Q6ZV89 423 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 CARM1Q86X55 608 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 ZCCHC7Q8N3Z6 543 aaKnown RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 CHDHQ8NE62 594 aaPredicted RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 OR5AU1Q8NGC0 362 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 OR10V1Q8NGI7 309 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 WDR36Q8NI36 951 aaKnown RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 MAPK15Q8TD08 544 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 FCGR1BQ92637 280 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 TTC28Q96AY4 2481 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 CPXM1Q96SM3 734 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 KRT12Q99456 494 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 GORASP2Q9H8Y8 452 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 SMPD3Q9NY59 655 aaPredicted RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 PURGQ9UJV8 347 aaKnown RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 WDR37Q9Y2I8 494 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 MRPS7Q9Y2R9 242 aaKnown RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 C2CD2Q9Y426 696 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 KLF2Q9Y5W3 355 aaPredicted RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 RGPD3A6NKT7 1758 aaPredicted RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 RGPD4Q7Z3J3 1758 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 COL2A1P02458 1487 aaPredicted RBP3.4□□□□□ -1.87
LINC01004-201ENST00000445184 ERVK-7P63135 1459 aa3.4□□□□□ -1.87
LINC01004-201ENST00000445184 ABCA3Q99758 1704 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 NWD2Q9ULI1 1742 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 TRBV5-4A0A0C4DH59 114 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 A0A0G2JLW4 131 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 LOC390937A0A1W2PQ73 354 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PRR23AA6NEV1 266 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ZSCAN5CA6NGD5 496 aaPredicted RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PMS2P5A8MQ11 134 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 MAGEB3O15480 346 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 SP1P08047 785 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 AZU1P20160 251 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PAX7P23759 505 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 MSNP26038 577 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 CA8P35219 290 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 MATKP42679 507 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 SSR1P43307 286 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PAX9P55771 341 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ABCE1P61221 599 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 HMGN5P82970 282 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 MAP2K1Q02750 393 aaPredicted RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ZP4Q12836 540 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 NFATC2Q13469 925 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 SHROOM1Q2M3G4 852 aaPredicted RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 POM121L1PQ3SYA9 428 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ZNF311Q5JNZ3 666 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ADAMTSL4-AS1Q5T5F5 129 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 DCAF12Q5T6F0 453 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ATAD3BQ5T9A4 648 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 WDR25Q64LD2 544 aaPredicted RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ASPHD2Q6ICH7 369 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 CWC27Q6UX04 472 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ZNF562Q6V9R5 426 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 FRRS1Q6ZNA5 592 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 RPAINQ86UA6 219 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 RANBP3LQ86VV4 465 aaPredicted RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 CCDC36Q8IYA8 594 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PDCL2Q8N4E4 241 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 MNS1Q8NEH6 495 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 TCP11Q8WWU5 503 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PINX1Q96BK5 328 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 NTNG2Q96CW9 530 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ZNF501Q96CX3 271 aaPredicted RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PGLYRP2Q96PD5 576 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 GTSE1Q9NYZ3 720 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 RABL2BQ9UNT1 228 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 RNF6Q9Y252 685 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 RRP15Q9Y3B9 282 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 PYGO1Q9Y3Y4 419 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 CHD2O14647 1828 aaKnown RBP3.39□□□□□ -1.87
LINC01004-201ENST00000445184 ADAMTS7Q9UKP4 1686 aa3.39□□□□□ -1.87
LINC01004-201ENST00000445184 CLIP1P30622 1438 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 C10orf71Q711Q0 1435 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 LAMC1P11047 1609 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 UQCRHLA0A096LP55 91 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 IGHV3-38A0A0C4DH36 116 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 MBLAC1A4D2B0 266 aaPredicted RBP3.38□□□□□ -1.87
LINC01004-201ENST00000445184 ASB14A6NK59 587 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 MPTX1A8MV57 137 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 TCP10L2B9ZVM9 353 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 H3BTX0 84 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 PDLIM1O00151 329 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 IMPA2O14732 288 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 ALOX15BO15296 676 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 HMMRO75330 724 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 MTRF1O75570 445 aaKnown RBP3.38□□□□□ -1.87
LINC01004-201ENST00000445184 CA3P07451 260 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 UQCRHP07919 91 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 CCDC159P0C7I6 412 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 PRKAR1AP10644 381 aa3.38□□□□□ -1.87
LINC01004-201ENST00000445184 EPB41P11171 864 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms