RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CEBPEQ15744 281 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF750Q32MQ0 723 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 RNF130Q86XS8 419 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 LACC1Q8IV20 430 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ZZZ3Q8IYH5 903 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 C11orf65Q8NCR3 313 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 SUN3Q8TAQ9 357 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 IFI44Q8TCB0 444 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 NEURL3Q96EH8 262 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF681Q96N22 645 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF768Q9H5H4 540 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 EPS8L2Q9H6S3 715 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CCM2LQ9NUG4 571 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 MAP4K5Q9Y4K4 846 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CACNG2Q9Y698 323 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ARID1BQ8NFD5 2236 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 LAMA1P25391 3075 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 A0A087WXM4 84 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CLDN25C9JDP6 229 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CYR61O00622 381 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ASNA1O43681 348 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CREG1O75629 220 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 RNH1P13489 461 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ETFAP13804 333 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 AVPR1BP47901 424 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 PRIM2P49643 509 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TP53BP2Q13625 1128 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 VEZF1Q14119 521 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 GPR19Q15760 415 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TBCELQ5QJ74 424 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 PLA2G2CQ5R387 149 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 C6orf52Q5T4I8 152 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 SAXO2Q658L1 398 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 LAIR1Q6GTX8 287 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 BHLHB9Q6PI77 547 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 SZRD1Q7Z422 152 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 C6orf120Q7Z4R8 191 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 PTOV1Q86YD1 416 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 LRRC25Q8N386 305 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 OR4D9Q8NGE8 314 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 OR52E4Q8NGH9 312 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 SH3YL1Q96HL8 342 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF597Q96LX8 424 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TUBA1CQ9BQE3 449 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 C11orf16Q9NQ32 467 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 FGF21Q9NSA1 209 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ZCCHC3Q9NUD5 404 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 GPATCH2Q9NW75 528 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 SERTAD3Q9UJW9 196 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ANAPC2Q9UJX6 822 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 DIMT1Q9UNQ2 313 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 MRPS33Q9Y291 106 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM131Q92545 1883 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 A0A0G2JMP0 313 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TCRBV5S2A0A599 114 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 LNP1A1A4G5 178 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 SLITRK5O94991 958 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 MED26O95402 600 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ANKRD34CP0C6C1 535 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 FOLR1P15328 257 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TSPAN7P41732 249 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CASP3P42574 277 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CASP9P55211 416 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 COPZ1P61923 177 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 RBBP4Q09028 425 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 COX20Q5RI15 118 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 GCNT6Q5T4J0 391 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 IRAK1BP1Q5VVH5 260 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM64Q6YI46 380 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF574Q6ZN55 896 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ADAMTS18Q8TE60 1221 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 POP5Q969H6 163 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 SLCO4A1Q96BD0 722 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 MMABQ96EY8 250 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CHST8Q9H2A9 424 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 GPN2Q9H9Y4 310 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 ENAMQ9NRM1 1142 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CUTCQ9NTM9 273 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 HCN3Q9P1Z3 774 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 PCDHGB2Q9Y5G2 931 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TP53BP1Q12888 1972 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-201ENST00000442201 A0A1W2PS29 197 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 FAM227AF5H4B4 570 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 GPR75O95800 540 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 NUDT7P0C024 238 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 TMBIM6P55061 237 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 MLLT10P55197 1068 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 ITGA1P56199 1179 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 DUSP2Q05923 314 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 ANKRD39Q53RE8 183 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 LYPD8Q6UX82 237 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 TMPRSS9Q7Z410 1059 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 OR4N5Q8IXE1 308 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 OR1L3Q8NH93 324 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 SFXN5Q8TD22 340 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 NETO1Q8TDF5 533 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 COL26A1Q96A83 441 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 PPWD1Q96BP3 646 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms