RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 KRT6AP02538 564 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 KRT6BP04259 564 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 GP1BAP07359 652 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 SELEP16581 610 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZNF19P17023 458 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 GABRG2P18507 467 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 CD27P26842 260 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 CHRNA3P32297 505 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 KRT6CP48668 564 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZNF75DP51815 510 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 NDUFV3P56181 108 aaKnown RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 MLF1P58340 268 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ERVK-16P61578 105 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 HNRNPKP61978 463 aaKnown RBP eCLIP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ARHGAP1Q07960 439 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 HSPB3Q12988 150 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 EIF3IQ13347 325 aaKnown RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 RUNX3Q13761 415 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 VEZF1Q14119 521 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 KIAA0141Q14154 515 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 C15orf59Q2T9L4 293 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ALDH1L2Q3SY69 923 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 EOGTQ5NDL2 527 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCDC30Q5VVM6 783 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 SPATA1Q5VX52 437 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 FAM180BQ6P0A1 224 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 IL17RELQ6ZVW7 336 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 C5orf24Q7Z6I8 188 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 DNAAF3Q8N9W5 541 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 OR10S1Q8NGN2 331 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 SPPL2AQ8TCT8 520 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 STARD8Q92502 1023 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 NXNL1Q96CM4 212 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 YTHDF1Q9BYJ9 559 aaKnown RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 OCR1Q9BZK8 76 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ILKAPQ9H0C8 392 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ING2Q9H160 280 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 TM9SF3Q9HD45 589 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 RCOR3Q9P2K3 495 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 IKZF3Q9UKT9 509 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZNF215Q9UL58 517 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 NAALAD2Q9Y3Q0 740 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLCO1B1Q9Y6L6 691 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 U3KQK5 164 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 MYO18AQ92614 2054 aaKnown RBP2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 LRP2P98164 4655 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 A0A1W2PPQ1 181 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 A0A1W2PQ72 361 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 AGAP14A8MT82 685 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 DNAJB6O75190 326 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 BAG3O95817 575 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 ALOX12P18054 663 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 EDNRAP25101 427 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 LMO2P25791 158 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 GCH1P30793 250 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLC11A1P49279 550 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 MRPS6P82932 125 aaKnown RBP2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 Q1RN00 199 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 CLLU1OSQ5K130 101 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 KHDRBS2Q5VWX1 349 aaKnown RBP2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 WDR59Q6PJI9 974 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 LRRC75A-AS1Q8N1F1 130 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 NOA1Q8NC60 698 aaKnown RBP2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 CA5BP1Q8WTZ4 195 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 DNAJB3Q8WWF6 145 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZBED6CLQ96FA7 236 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCT8L2Q96SF2 557 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 PRRG4Q9BZD6 226 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 STRADBQ9C0K7 418 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 DNAI2Q9GZS0 605 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCDC68Q9H2F9 335 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 EGLN3Q9H6Z9 239 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 PIKFYVEQ9Y2I7 2098 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 FREM3P0C091 2139 aa2.05□□□□□ -2.08
HMGB1P18-201ENST00000438801 STARD9Q9P2P6 4700 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 IQCMA0A1B0GVH7 501 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 FAM168BA1KXE4 195 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 ARHGEF33A8MVX0 844 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 IDSB3KWA1 339 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 H0Y9J4 135 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 K7ENM7 598 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 MPHOSPH10O00566 681 aaKnown RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 ABCB11O95342 1321 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 RENP00797 406 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 LDHCP07864 332 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 RAB40ALP0C0E4 278 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLC35E2P0CK97 266 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 VDRP11473 427 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 PFKFB1P16118 471 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 MGMTP16455 207 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 IDSP22304 550 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 PKLRP30613 574 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCR2P41597 374 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 STAT2P52630 851 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 KCNK10P57789 538 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 PPIAP62937 165 aaKnown RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 EPS8Q12929 822 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 CUL3Q13618 768 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 OPCMLQ14982 345 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 PCLAFQ15004 111 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms