RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 FAM91A1Q658Y4 838 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 REP15Q6BDI9 236 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 IGFL3Q6UXB1 125 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 ASB18Q6ZVZ8 466 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 TREML1Q86YW5 311 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 SLC34A3Q8N130 599 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 POU5F2Q8N7G0 328 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 COX18Q8N8Q8 333 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 MIPOL1Q8TD10 442 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 ZFP90Q8TF47 636 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 HAS2Q92819 552 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 HOXB13Q92826 284 aaPredicted RBP13.6□□□□□ -0.23
SKA2-202ENST00000437036 TMEM125Q96AQ2 219 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 YIPF4Q9BSR8 244 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.6□□□□□ -0.23
SKA2-202ENST00000437036 PIGUQ9H490 435 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 EFCAB1Q9HAE3 211 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 TPT1P8Q9HAU6 139 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 DUSP22Q9NRW4 184 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 EXD2Q9NVH0 621 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 GIN1Q9NXP7 522 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 CBLCQ9ULV8 474 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 CORO2BQ9UQ03 480 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 TP53TG5Q9Y2B4 290 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 NPFFR2Q9Y5X5 522 aa13.6□□□□□ -0.23
SKA2-202ENST00000437036 USP24Q9UPU5 2620 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 FBP2O00757 339 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 HS6ST1O60243 411 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 REM1O75628 298 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 ACP2P11117 423 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 ABCD3P28288 659 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 PTPN6P29350 595 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 IL12BP29460 328 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 CD96P40200 585 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 SOX3P41225 446 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 RPP38P78345 283 aaKnown RBP13.59□□□□□ -0.23
SKA2-202ENST00000437036 ART3Q13508 389 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 TUBA3CQ13748 450 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 DUSP5Q16690 384 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 TRMT5Q32P41 509 aaKnown RBP13.59□□□□□ -0.23
SKA2-202ENST00000437036 TUBA3EQ6PEY2 450 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 IL20RBQ6UXL0 311 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 NPSR1Q6W5P4 371 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 WDR53Q7Z5U6 358 aaPredicted RBP13.59□□□□□ -0.23
SKA2-202ENST00000437036 RETREG3Q86VR2 466 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 RNF130Q86XS8 419 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 CYP4Z2PQ8N1L4 340 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 SLC16A11Q8NCK7 471 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 FBXO30Q8TB52 745 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 RCN3Q96D15 328 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 OMA1Q96E52 524 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 SGCZQ96LD1 299 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 OR7D2Q96RA2 312 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 UBL7Q96S82 380 aaPredicted RBP13.59□□□□□ -0.23
SKA2-202ENST00000437036 SH3GL1Q99961 368 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 IL1RL2Q9HB29 575 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
SKA2-202ENST00000437036 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 LRFN1Q9P244 771 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 MAP10Q9P2G4 905 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 MGAQ8IWI9 3026 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 DOCK10Q96BY6 2186 aa13.59□□□□□ -0.23
SKA2-202ENST00000437036 NUP214P35658 2090 aaPredicted RBP13.59□□□□□ -0.23
SKA2-202ENST00000437036 TP53I11O14683 189 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 AIM2O14862 343 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 ASNA1O43681 348 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 ABCB7O75027 752 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 PPM1BO75688 479 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 OR6B1O95007 311 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 NADKO95544 446 aaPredicted RBP13.58□□□□□ -0.24
SKA2-202ENST00000437036 AK1P00568 194 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 FBXO45P0C2W1 286 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 PIGAP37287 484 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 MAP3K8P41279 467 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 CRATP43155 626 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 MNAT1P51948 309 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 RPS26P62854 115 aaKnown RBP13.58□□□□□ -0.24
SKA2-202ENST00000437036 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
SKA2-202ENST00000437036 EFR3AQ14156 821 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 KRT72Q14CN4 511 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 GTDC1Q4AE62 458 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 TNFAIP8L2Q6P589 184 aaPredicted RBP13.58□□□□□ -0.24
SKA2-202ENST00000437036 DLEU7Q6UYE1 221 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 RTL4Q6ZR62 310 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 PRR22Q8IZ63 422 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 OR52N2Q8NGI0 321 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 PNPT1Q8TCS8 783 aaKnown RBP13.58□□□□□ -0.24
SKA2-202ENST00000437036 TMBIM1Q969X1 311 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 ROPN1LQ96C74 230 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 LRRC58Q96CX6 371 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 SPACA9Q96E40 222 aaPredicted RBP13.58□□□□□ -0.24
SKA2-202ENST00000437036 RMND5BQ96G75 393 aaPredicted RBP13.58□□□□□ -0.24
SKA2-202ENST00000437036 SLC35A4Q96G79 324 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 COL21A1Q96P44 957 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 CGREF1Q99674 301 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 G6PC3Q9BUM1 346 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 BTBD2Q9BX70 525 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 OR51I1Q9H343 314 aa13.58□□□□□ -0.24
SKA2-202ENST00000437036 TRIM45Q9H8W5 580 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms