RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 PARD6GQ9BYG4 376 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 DZANK1Q9NVP4 752 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 GPATCH2LQ9NWQ4 482 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 PLEKHB1Q9UF11 243 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 CARHSP1Q9Y2V2 147 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 BLOC1S5-TXNDC5H3BN57 136 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 MKRN2OSH3BPM6 223 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 MBTPS2O43462 519 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 PQBP1O60828 265 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 OPN1LWP04000 364 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ALDOBP05062 364 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 NQO2P16083 231 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 HOXB6P17509 224 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 RCC1P18754 421 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 HNF1AP20823 631 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 BMI1P35226 326 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 LBX1P52954 281 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 SUCLG1P53597 346 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 GAB1Q13480 694 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ARHGEF7Q14155 803 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 MBTPS1Q14703 1052 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 KCNMB1Q16558 191 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 FAM187BQ17R55 369 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 HEATR6Q6AI08 1181 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 LCLAT1Q6UWP7 414 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ENPP6Q6UWR7 440 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 LRRN1Q6UXK5 716 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 TPGS1Q6ZTW0 290 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 OTOP2Q7RTS6 562 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ZNF619Q8N2I2 560 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ARL14Q8N4G2 192 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 FAM46DQ8NEK8 389 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 OR8J2Q8NGG1 315 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 OR2L8Q8NGY9 312 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 C22orf15Q8WYQ4 148 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 RHBDF1Q96CC6 855 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 FOXRED1Q96CU9 486 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 CCDC115Q96NT0 180 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 FAM83CQ9BQN1 747 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ADAT1Q9BUB4 502 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 POLDIP3Q9BY77 421 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 NFKBIZQ9BYH8 718 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 GAL3ST2Q9H3Q3 398 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 PIGMQ9H3S5 423 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 METTL17Q9H7H0 456 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 GOLGA2P5Q9HBQ8 144 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 BARX1Q9HBU1 254 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 LHX9Q9NQ69 397 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 SDR39U1Q9NRG7 319 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 OR12D3Q9UGF7 316 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ST3GAL5Q9UNP4 418 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 ASB1Q9Y576 335 aa7.53□□□□□ -1.2
GAPVD1-209ENST00000436712 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 SCN1AP35498 2009 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 C2CD4BA6NLJ0 364 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 B4E171 279 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 EEDO75530 441 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 AQP8O94778 261 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 ENDOD1O94919 500 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 HOXC8P31273 242 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CSF2RBP32927 897 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 RGS4P49798 205 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CSRP3P50461 194 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 ANXA11P50995 505 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 DAPP51397 102 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CRYBB1P53674 252 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 RBX1P62877 108 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 LMAN2Q12907 356 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 HNRNPA0Q13151 305 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 MED22Q15528 200 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 INPP5JQ15735 1006 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 XKR4Q5GH76 650 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 GCNT6Q5T4J0 391 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 TSTD2Q5T7W7 516 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 OR6B2Q6IFH4 312 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CNIH2Q6PI25 160 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CYHR1Q6ZMK1 362 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CUZD1Q86UP6 607 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 FSTL5Q8N475 847 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 C1orf52Q8N6N3 182 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 C15orf54Q8N8G6 183 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CCDC54Q8NEL0 328 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 OR10K1Q8NGX5 313 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 STOML3Q8TAV4 291 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 KHSRPQ92945 711 aaKnown RBP eCLIP7.52□□□□□ -1.213e-7■■□□□ 14.4
GAPVD1-209ENST00000436712 ISG20Q96AZ6 181 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 L3HYPDHQ96EM0 354 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 KIF12Q96FN5 646 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CERS2Q96G23 380 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 RNF157Q96PX1 679 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 TMEM209Q96SK2 561 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 MAPKAP1Q9BPZ7 522 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 PIGQQ9BRB3 760 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 JAM3Q9BX67 310 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 GPR62Q9BZJ7 368 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CRISPLD1Q9H336 500 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 CERS4Q9HA82 394 aa7.52□□□□□ -1.21
GAPVD1-209ENST00000436712 EXOSC3Q9NQT5 275 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms