RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 NT5CQ8TCD5 201 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 GNPDA2Q8TDQ7 276 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 DIO2Q92813 273 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 C10orf90Q96M02 699 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 ACTRT3Q9BYD9 372 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 PLA2G12AQ9BZM1 189 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 NUAK2Q9H093 628 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 SIAEQ9HAT2 523 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 CRNNQ9UBG3 495 aaPredicted RBP17.43■□□□□ 0.38
CLK1-205ENST00000434813 SLC13A4Q9UKG4 626 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 STUB1Q9UNE7 303 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 SPTBN5Q9NRC6 3674 aaKnown RBP17.43■□□□□ 0.38
CLK1-205ENST00000434813 BTN3A3O00478 584 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 CYP7B1O75881 506 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 SNX4O95219 450 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 EML2O95834 649 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 PRKAR1BP31321 381 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 CRYBB2P43320 205 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 RGS1Q08116 209 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 TRAM2Q15035 370 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 SPANXN2Q5MJ10 180 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 ATAD3BQ5T9A4 648 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 ASPGQ86U10 573 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 VRK2Q86Y07 508 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 FAM83FQ8NEG4 500 aaPredicted RBP17.43■□□□□ 0.38
CLK1-205ENST00000434813 TEX47Q8TBZ9 253 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 ASPNQ9BXN1 380 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 POLR2J2Q9GZM3 115 aaKnown RBP17.43■□□□□ 0.38
CLK1-205ENST00000434813 ANKRA2Q9H9E1 313 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 EXOSC4Q9NPD3 245 aaKnown RBP17.43■□□□□ 0.38
CLK1-205ENST00000434813 PCDHGB6Q9Y5F9 930 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 MN1Q10571 1320 aaPredicted RBP17.42■□□□□ 0.38
CLK1-205ENST00000434813 HYKKA2RU49 373 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 FAM170BA6NMN3 283 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 UBXN7O94888 489 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 TNFRSF17Q02223 184 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 HTR4Q13639 388 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 LTB4RQ15722 352 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 C3orf38Q5JPI3 329 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 SDE2Q6IQ49 451 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 HEPHL1Q6MZM0 1159 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 C16orf62Q7Z3J2 963 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 POC5Q8NA72 575 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 KCT2Q8NC54 265 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 OR9Q1Q8NGQ5 310 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 TMEM163Q8TC26 289 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 OR1E3Q8WZA6 343 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 CNPPD1Q9BV87 410 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 POLMQ9NP87 494 aaPredicted RBP17.42■□□□□ 0.38
CLK1-205ENST00000434813 MRPS18AQ9NVS2 196 aaKnown RBP17.42■□□□□ 0.38
CLK1-205ENST00000434813 NTMQ9P121 344 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 GPR55Q9Y2T6 319 aaPredicted RBP17.42■□□□□ 0.38
CLK1-205ENST00000434813 CHST2Q9Y4C5 530 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 A0A1W2PQF6 199 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 IRGMA1A4Y4 181 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 POM121BA6NF01 834 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 ZNF670-ZNF695F2Z2N8 137 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 LOC110117498-PIK3R3F6TDL0 507 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 AQP9O43315 295 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 ZNF888P0CJ79 500 aaPredicted RBP17.42■□□□□ 0.38
CLK1-205ENST00000434813 COL9A1P20849 921 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 SEPHS1P49903 392 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 CD300CQ08708 224 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 TSPAN31Q12999 210 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 SNAPC1Q16533 368 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 SLC27A4Q6P1M0 643 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 PAQR6Q6TCH4 344 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 SLC36A4Q6YBV0 504 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 PHC2Q8IXK0 858 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 PIK3R3Q92569 461 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 KAT2AQ92830 837 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 SLC22A18Q96BI1 424 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 FAM210AQ96ND0 272 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 MS4A4EQ96PG1 132 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 EGLN3Q9H6Z9 239 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 TRIM45Q9H8W5 580 aaPredicted RBP17.42■□□□□ 0.38
CLK1-205ENST00000434813 SMURF1Q9HCE7 757 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 SEMA4GQ9NTN9 838 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 PCOLCE2Q9UKZ9 415 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 MTCH2Q9Y6C9 303 aa17.42■□□□□ 0.38
CLK1-205ENST00000434813 TICRRQ7Z2Z1 1910 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 EYSQ5T1H1 3165 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 SOX1O00570 391 aaPredicted RBP17.41■□□□□ 0.38
CLK1-205ENST00000434813 PRODHO43272 600 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 FRS3O43559 492 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 ZIC2O95409 532 aaPredicted RBP17.41■□□□□ 0.38
CLK1-205ENST00000434813 SLC35G6P0C7Q6 338 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 GTF2E2P29084 291 aaKnown RBP17.41■□□□□ 0.38
CLK1-205ENST00000434813 GAS1P54826 345 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 ST3GAL3Q11203 375 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 NFATC4Q14934 902 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 KLHL22Q53GT1 634 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 MFSD12Q6NUT3 480 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 RASSF6Q6ZTQ3 369 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 LRRC25Q8N386 305 aaPredicted RBP17.41■□□□□ 0.38
CLK1-205ENST00000434813 FLVCR1-AS1Q8TAF5 88 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 TRMT61AQ96FX7 289 aaKnown RBP17.41■□□□□ 0.38
CLK1-205ENST00000434813 FCRL4Q96PJ5 515 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 ZNF624Q9P2J8 865 aaPredicted RBP17.41■□□□□ 0.38
CLK1-205ENST00000434813 KLHL3Q9UH77 587 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms