RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PPP3R1P63098 170 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 EEF1A2Q05639 463 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SIGLEC14Q08ET2 396 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 DOC2AQ14183 400 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 MFSD13AQ14CX5 517 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SF3A2Q15428 464 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TAB1Q15750 504 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ZRANB3Q5FWF4 1079 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TOR2AQ5JU69 321 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ANXA8L1Q5VT79 327 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 C12orf73Q69YU5 71 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 NADSYN1Q6IA69 706 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 FAM131AQ6UXB0 335 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RTN4RL1Q86UN2 441 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ANKRD46Q86W74 232 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RASGRP3Q8IV61 690 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 C9orf62Q8N4C0 152 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ZBTB2Q8N680 514 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 POMGNT2Q8NAT1 580 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 DBF4BQ8NFT6 615 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 NLGN4YQ8NFZ3 816 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 OR9Q1Q8NGQ5 310 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CLHC1Q8NHS4 586 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 WDR36Q8NI36 951 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TMEM163Q8TC26 289 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ENKURQ8TC29 256 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 HASPINQ8TF76 798 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 CREB3L1Q96BA8 519 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TRMT61AQ96FX7 289 aaKnown RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 C1orf159Q96HA4 380 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RPRD1AQ96P16 312 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TSSK3Q96PN8 268 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 AIFM2Q9BRQ8 373 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TEX12Q9BXU0 123 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 PIGUQ9H490 435 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 TIGARQ9NQ88 270 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 ACER3Q9NUN7 267 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RLIMQ9NVW2 624 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 SPATA6Q9NWH7 488 aaPredicted RBP7.61□□□□□ -1.19
VTI1A-202ENST00000432306 FZD4Q9ULV1 537 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 RAI2Q9Y5P3 530 aa7.61□□□□□ -1.19
VTI1A-202ENST00000432306 C7orf66A4D0T2 115 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 PRAMEF25A6NGN4 478 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TUBAL3A6NHL2 446 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 IQCF5A8MTL0 148 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 C5orf67F2Z3F1 127 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TRIM77I1YAP6 450 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TMEM189-UBE2V1I3L0A0 370 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 QSOX1O00391 747 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 RNASET2O00584 256 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TFECO14948 347 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 MYL12BO14950 172 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 SCAMP2O15127 329 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 SLC16A5O15375 505 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 SLC22A5O76082 557 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 OAZ2O95190 189 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 POP4O95707 220 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 B3GALT4O96024 378 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TPOP07202 933 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 SRPRAP08240 638 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 HSMCR30P0CW71 290 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 HLA-EP13747 358 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 ATF6P18850 670 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 MYL12AP19105 171 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TACR2P21452 398 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 CTNNB1P35222 781 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TALDO1P37837 337 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 GDF5P43026 501 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 AFF1P51825 1210 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 BLVRAP53004 296 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 PCBP3P57721 371 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 HYAL1Q12794 435 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TUSC3Q13454 348 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TPBGQ13641 420 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 KCNC3Q14003 757 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 DUSP6Q16828 381 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 EXOC3L2Q2M3D2 409 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 GPR33Q49SQ1 333 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 HSD17B12Q53GQ0 312 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 PDZK1Q5T2W1 519 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 SAMD5Q5TGI4 173 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 LIPJQ5W064 366 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 FRG2Q64ET8 278 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 NCEH1Q6PIU2 408 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 TMEM107Q6UX40 140 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 ZNF730Q6ZMV8 503 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 CHST9Q7L1S5 443 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 CDH24Q86UP0 819 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 SLC30A8Q8IWU4 369 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 BBS7Q8IWZ6 715 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 GPALPP1Q8IXQ4 340 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 KLHDC8AQ8IYD2 350 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 CELF5Q8N6W0 485 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 GALNT11Q8NCW6 608 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 OR8J1Q8NGP2 316 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 LHFPL5Q8TAF8 219 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 GEMIN6Q8WXD5 167 aaKnown RBP7.6□□□□□ -1.19
VTI1A-202ENST00000432306 FGF11Q92914 225 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 SLC6A18Q96N87 628 aa7.6□□□□□ -1.19
VTI1A-202ENST00000432306 FRG2BQ96QU4 278 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms