RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 RAD52P43351 418 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 SEMA3BQ13214 749 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 SLC22A25Q6T423 547 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM130Q8N3G9 435 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 BCORP1Q8N888 145 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM102Q8N9M5 508 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 HUS1BQ8NHY5 278 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 GIPC3Q8TF64 312 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF578Q96N58 590 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 DHRS4Q9BTZ2 278 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 CCDC28BQ9BUN5 200 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PLA2G2FQ9BZM2 168 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ANKZF1Q9H8Y5 726 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 CALHM2Q9HA72 323 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FAIMQ9NVQ4 179 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 SARDHQ9UL12 918 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 NOP16Q9Y3C1 178 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 NFS1Q9Y697 457 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PLXND1Q9Y4D7 1925 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 C17orf113A0A1B0GUU1 675 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PMS2P1A4D2B8 440 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FANCGO15287 622 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 IDH3BO43837 385 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 B4GALT3O60512 393 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PRLP01236 227 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 OPN1SWP03999 348 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FAM153BP0C7A2 387 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 RNF144AP50876 292 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 HADHBP55084 474 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PPIAP62937 165 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 MPP2Q14168 576 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ZSWIM7Q19AV6 140 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FCRLBQ6BAA4 426 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TTC27Q6P3X3 843 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 KRT74Q7RTS7 529 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 MREGQ8N565 214 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 EIF1ADQ8N9N8 165 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF540Q8NDQ6 660 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 CPEB3Q8NE35 698 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 OR2L3Q8NG85 312 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF347Q96SE7 839 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 DPH1Q9BZG8 443 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 HAPLN2Q9GZV7 340 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 SEMA6AQ9H2E6 1030 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 POPDC3Q9HBV1 291 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 OBP2BQ9NPH6 170 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TVP23BQ9NYZ1 205 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FAM96BQ9Y3D0 163 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 GRIP1Q9Y3R0 1128 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 OARD1Q9Y530 152 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ATP23Q9Y6H3 246 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 CSNK1G3Q9Y6M4 447 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ANKRD34BA5PLL1 514 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TP73O15350 636 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 KIAA0513O60268 411 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 LDB3O75112 727 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PENKP01210 267 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 GP1BAP07359 652 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 MYF5P13349 255 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 CFL1P23528 166 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 GADD45AP24522 165 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 CCR2P41597 374 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ACADVLP49748 655 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 OR12D2P58182 307 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PPP2CBP62714 309 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PPP2CAP67775 309 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 LIPEQ05469 1076 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 SCGB2A2Q13296 93 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 GANABQ14697 944 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FASTKD3Q14CZ7 662 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 MED22Q15528 200 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM176BQ3YBM2 270 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 REEP3Q6NUK4 255 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 GUSBP11Q6P575 273 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ISLR2Q6UXK2 745 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 KMT5CQ86Y97 462 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF808Q8N4W9 903 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FRMD1Q8N878 549 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 YIPF7Q8N8F6 280 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 CPT1CQ8TCG5 803 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF570Q96NI8 536 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FCRL3Q96P31 734 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 BHLHE41Q9C0J9 482 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 NUAK2Q9H093 628 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 DSN1Q9H410 356 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 ENAMQ9NRM1 1142 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 NOSIPQ9Y314 301 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 GREB1Q4ZG55 1949 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TSC2P49815 1807 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM202A6NGA9 273 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 TRIM64BA6NI03 449 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 hCG_2039718K7EN88 272 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 AP1G1O43747 822 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 SERPINA6P08185 405 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 GSTM3P21266 225 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 CSNK1A1P48729 337 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 SLC9A3P48764 834 aa6.81□□□□□ -1.32
CNOT4-206ENST00000428680 GBX2P52951 348 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms