RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CRYGNQ8WXF5 182 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 TADA1Q96BN2 335 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 SAMD8Q96LT4 415 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 OR4F4Q96R69 305 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ST6GALNAC5Q9BVH7 336 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ERVK-6Q9BXR3 956 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 TSPY26PQ9H489 355 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ROPN1Q9HAT0 212 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 AMBNQ9NP70 447 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 YAE1D1Q9NRH1 226 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 CENPMQ9NSP4 180 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 CNOT2Q9NZN8 540 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 DHRS4-AS1Q9P1J3 65 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ABCD2Q9UBJ2 740 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 PRODH2Q9UF12 536 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 IL20RAQ9UHF4 553 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RSPH14Q9UHP6 348 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RNF24Q9Y225 148 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 PIN4Q9Y237 131 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 KLHDC2Q9Y2U9 406 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 KLF2Q9Y5W3 355 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 RAB3GAP2Q9H2M9 1393 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 NCOA2Q15596 1464 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 EIF4G3O43432 1585 aaKnown RBP1.92□□□□□ -2.1
PTPRC-208ENST00000427110 CROCC2H7BZ55 1655 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ADGBQ8N7X0 1667 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 ITSN2Q9NZM3 1697 aa1.92□□□□□ -2.1
PTPRC-208ENST00000427110 HFM1A2PYH4 1435 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 MIA2Q96PC5 1412 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 UACAQ9BZF9 1416 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 EPRSP07814 1512 aaKnown RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 MAGI3Q5TCQ9 1506 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 KIAA0586Q9BVV6 1533 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 DNMT1P26358 1616 aaKnown RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SYNJ2O15056 1496 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 MAGI1Q96QZ7 1491 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 IGHV3OR16-12A0A075B7B8 117 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 NPIPA5A0A0B4J1W7 369 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 EFCAB7A8K855 629 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SRRM5B3KS81 715 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 NPIPA5E9PKD4 350 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SDC3O75056 442 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 KBTBD11O94819 623 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 VENTXO95231 258 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PRAMEF12O95522 483 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 IGSF6O95976 241 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PIGRP01833 764 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SLC35G4P0C7Q5 338 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PVRP15151 417 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 TSPAN8P19075 237 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 RPA1P27694 616 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 MAT2AP31153 395 aaKnown RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CHRNA3P32297 505 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PTGER3P43115 390 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CAMLGP49069 296 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SGSHP51688 502 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 HAND2P61296 217 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 IL9RQ01113 521 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PDIA5Q14554 519 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CEBPEQ15744 281 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PKN2Q16513 984 aaKnown RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PPP1R3AQ16821 1122 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 C17orf58Q2M2W7 97 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 MS4A13Q5J8X5 152 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SLX4IPQ5VYV7 408 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PRR5LQ6MZQ0 368 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF774Q6NX45 483 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PNCKQ6P2M8 343 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 STOX1Q6ZVD7 989 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 PRSS48Q7RTY5 328 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SERINC5Q86VE9 423 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ERICH1Q86X53 443 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CDC20BQ86Y33 519 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SLC39A11Q8N1S5 342 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 RNF148Q8N7C7 305 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF397Q8NF99 534 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 FLVCR1-AS1Q8TAF5 88 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 VN1R17PQ8TDU5 208 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 KCNK16Q96T55 309 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 APOL2Q9BQE5 337 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 TTYH2Q9BSA4 534 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CARD6Q9BX69 1037 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 NMNAT2Q9BZQ4 307 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 TRIM9Q9C026 710 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ZBP1Q9H171 429 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 RWDD1Q9H446 243 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ALG9Q9H6U8 611 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ACTR8Q9H981 624 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 NGBQ9NPG2 151 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 FAM114A2Q9NRY5 505 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 DCAF13Q9NV06 445 aaKnown RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 ZNF446Q9NWS9 450 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 SOHLH2Q9NX45 425 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 DUS2Q9NX74 493 aaKnown RBP1.91□□□□□ -2.1
PTPRC-208ENST00000427110 CLEC5AQ9NY25 188 aa1.91□□□□□ -2.1
PTPRC-208ENST00000427110 RAI14Q9P0K7 980 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms