RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CCR4P51679 360 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 GGTA1PQ4G0N0 100 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 AGAP6Q5VW22 663 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 NUDT13Q86X67 352 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 ZNF547Q8IVP9 402 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 ADGRF3Q8IZF5 1079 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 AGAP4Q96P64 663 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 PLA2G2FQ9BZM2 168 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 IRF2BPLQ9H1B7 796 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 SLC5A10A0PJK1 596 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 TEX46H3BTG2 121 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 MID1O15344 667 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 ARHGEF9O43307 516 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 PIP5K1CO60331 668 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 ADH1CP00326 375 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 MAPK9P45984 424 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 GIPRP48546 466 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 CCR8P51685 355 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 TGM3Q08188 693 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 RBBP4Q09028 425 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 WSCD2Q2TBF2 565 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 PLBD1Q6P4A8 553 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 RNF44Q7L0R7 432 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 COMTD1Q86VU5 262 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 CHIAQ9BZP6 476 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 CLEC1BQ9P126 229 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
USP42-203ENST00000426246 P2RX2Q9UBL9 471 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 HSPE1-MOB4S4R3N1 261 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 RP1L1Q8IWN7 2480 aaPredicted RBP12.59□□□□□ -0.39
USP42-203ENST00000426246 SPINT1O43278 529 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 SYPP08247 313 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 ARAFP10398 606 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 MVDP53602 400 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 HCCSP53701 268 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 RPTNQ6XPR3 784 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 ZNF367Q7RTV3 350 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 HDDC3Q8N4P3 179 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 OR56A3Q8NH54 315 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 TEFMQ96QE5 360 aaKnown RBP12.59□□□□□ -0.39
USP42-203ENST00000426246 MND1Q9BWT6 205 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 TXNL4BQ9NX01 149 aaKnown RBP12.59□□□□□ -0.39
USP42-203ENST00000426246 ATG4BQ9Y4P1 393 aa12.59□□□□□ -0.39
USP42-203ENST00000426246 A0A0B4J203 849 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 J3QLW9 94 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 SOCS6O14544 535 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 AKR7A2O43488 359 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 ADRB3P13945 408 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 ZNF19P17023 458 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 ALAS2P22557 587 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 FAM71E1Q6IPT2 247 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 CNIH2Q6PI25 160 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 ESPNLQ6ZVH7 1005 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 CPOQ8IVL8 374 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 S1PR5Q9H228 398 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 CPNE5Q9HCH3 593 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 FBXL12Q9NXK8 326 aa12.58□□□□□ -0.39
USP42-203ENST00000426246 TP53BP1Q12888 1972 aaPredicted RBP12.58□□□□□ -0.39
USP42-203ENST00000426246 IGLV3-16A0A075B6K0 115 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 HMGN4O00479 90 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 PRNPP04156 253 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 KELP23276 732 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 SLC9A5Q14940 896 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 RAB30Q15771 203 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 PGBD3Q8N328 593 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 TP53I13Q8NBR0 393 aaPredicted RBP12.58□□□□□ -0.4
USP42-203ENST00000426246 OR8J1Q8NGP2 316 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 TM4SF18Q96CE8 201 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 SLC38A2Q96QD8 506 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 DPH1Q9BZG8 443 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 GLIPR2Q9H4G4 154 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 DDX31Q9H8H2 851 aaKnown RBP12.58□□□□□ -0.4
USP42-203ENST00000426246 SNX7Q9UNH6 387 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 HEATR5BQ9P2D3 2071 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 A0A1W2PRG6 482 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 SEMA7AO75326 666 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 DRD5P21918 477 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 MMP12P39900 470 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 MTNR1AP48039 350 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 CENPAP49450 140 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 FADDQ13158 208 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 FBXO43Q4G163 708 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 TOR1AIP1Q5JTV8 583 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 ZDHHC20Q5W0Z9 365 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 CDC73Q6P1J9 531 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 PGBD2Q6P3X8 592 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 VASH1Q7L8A9 365 aaPredicted RBP12.58□□□□□ -0.4
USP42-203ENST00000426246 PRICKLE2Q7Z3G6 844 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 PHC2Q8IXK0 858 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 METTL27Q8N6F8 245 aaPredicted RBP12.58□□□□□ -0.4
USP42-203ENST00000426246 ZNF566Q969W8 418 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 DTD2Q96FN9 168 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 CRELD1Q96HD1 420 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 SAMD8Q96LT4 415 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 RIPOR3Q96MK2 946 aa12.58□□□□□ -0.4
USP42-203ENST00000426246 ZNF559Q9BR84 538 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms