RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KRT75O95678 551 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 RNF4P78317 190 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 TCTN3Q6NUS6 607 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 TMEM19Q96HH6 336 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 IMMP1LQ96LU5 166 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-202ENST00000424478 A0A087WV62 115 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 LOC102723996A0A087X1L8 192 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 C2orf92A0A1B0GVN3 265 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 CLDN24A6NM45 220 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 A8MVJ9 347 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 DYRK3O43781 588 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 NPPAP01160 153 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 CHRM4P08173 479 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 ATP6V1B2P21281 511 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 ITPKBP27987 946 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-202ENST00000424478 FOXD4Q12950 439 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-202ENST00000424478 LRRC23Q53EV4 343 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-202ENST00000424478 SPPL2CQ8IUH8 684 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 COX18Q8N8Q8 333 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 SFXN5Q8TD22 340 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 ADAMTS17Q8TE56 1095 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 WWTR1Q9GZV5 400 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 POMPQ9Y244 141 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 OR10H1Q9Y4A9 318 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 TMEM200CA6NKL6 621 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 ALPPP05187 535 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 LRRC74AQ0VAA2 488 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 SAMD4BQ5PRF9 694 aaKnown RBP12.44□□□□□ -0.42
PRPF39-202ENST00000424478 GCNT6Q5T4J0 391 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 PGM2L1Q6PCE3 622 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 IGF2-ASQ6U949 168 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 HSDL2Q6YN16 418 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 CALHM3Q86XJ0 350 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 FAM86B1Q8N7N1 296 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 FAM13CQ8NE31 585 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 RAXQ9Y2V3 346 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 GCM2O75603 506 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-202ENST00000424478 H6PDO95479 791 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 MT-ND1P03886 318 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 NR2F1P10589 423 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 TNFRSF1BP20333 461 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 ME2P23368 584 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 CD82P27701 267 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 CHRNEQ04844 493 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 GPR68Q15743 365 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 CDC73Q6P1J9 531 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 NDUFAF7Q7L592 441 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 C16orf62Q7Z3J2 963 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 ZNF700Q9H0M5 742 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 CPNE5Q9HCH3 593 aa12.44□□□□□ -0.42
PRPF39-202ENST00000424478 ELOVL7A1L3X0 281 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 ARPC2O15144 300 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 GMFGO60234 142 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 OR2J2O76002 312 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 ALOX5P09917 674 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 KHKP50053 298 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 CRYBA2P53672 197 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 SCARB2Q14108 478 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 KPNB1Q14974 876 aaKnown RBP12.43□□□□□ -0.42
PRPF39-202ENST00000424478 C1orf146Q5VVC0 180 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 TMBIM1Q969X1 311 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 ADIPOR1Q96A54 375 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 PELOQ9BRX2 385 aaKnown RBP12.43□□□□□ -0.42
PRPF39-202ENST00000424478 NDE1Q9NXR1 346 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 NTMQ9P121 344 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 GSTA4O15217 222 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 HNRNPCL1O60812 293 aaKnown RBP12.43□□□□□ -0.42
PRPF39-202ENST00000424478 TFPTP0C1Z6 253 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 CDK6Q00534 326 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 VMACQ2NL98 169 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 MICU2Q8IYU8 434 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 ZNF614Q8N883 585 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 MORN4Q8NDC4 146 aa12.43□□□□□ -0.42
PRPF39-202ENST00000424478 BRIX1Q8TDN6 353 aaKnown RBP12.43□□□□□ -0.42
PRPF39-202ENST00000424478 ZBTB20Q9HC78 741 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-202ENST00000424478 SMG1Q96Q15 3661 aaKnown RBP12.43□□□□□ -0.42
PRPF39-202ENST00000424478 PEX12O00623 359 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 COQ9O75208 318 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 ENTPD5O75356 428 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 GLYATQ6IB77 296 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 BHLHB9Q6PI77 547 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 SLC29A4Q7RTT9 530 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 BHLHE22Q8NFJ8 381 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 DNAJB8Q8NHS0 232 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 VMP1Q96GC9 406 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 THOC3Q96J01 351 aaKnown RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 ADOQ96SZ5 270 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 SH3GL1Q99961 368 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 DEFB126Q9BYW3 111 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 CCDC86Q9H6F5 360 aaKnown RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 PRPF19Q9UMS4 504 aaKnown RBP12.42□□□□□ -0.42
PRPF39-202ENST00000424478 BSNQ9UPA5 3926 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 C15orf38-AP3S2A0A0A6YYH1 394 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 C2orf72A6NCS6 295 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 CLCN2P51788 898 aa12.42□□□□□ -0.42
PRPF39-202ENST00000424478 EEFSECP57772 596 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms