RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 GSTM5P46439 218 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 NAGLUP54802 743 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 WNT3P56703 355 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 CEBPEQ15744 281 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 CT45A2Q5DJT8 189 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 TNFAIP8L3Q5GJ75 292 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 SPDYAQ5MJ70 313 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 POMZP3Q6PJE2 187 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 SCIMPQ6UWF3 145 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 YRDCQ86U90 279 aaKnown RBP8.6□□□□□ -1.03
NUP50-205ENST00000419387 CCNYL1Q8N7R7 359 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 RELL2Q8NC24 303 aaPredicted RBP8.6□□□□□ -1.03
NUP50-205ENST00000419387 NAXEQ8NCW5 288 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 OR9A2Q8NGT5 310 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 KAT2AQ92830 837 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 TMBIM1Q969X1 311 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 EXOSC8Q96B26 276 aaKnown RBP8.6□□□□□ -1.03
NUP50-205ENST00000419387 CCDC126Q96EE4 140 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 LRRC46Q96FV0 321 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 COL21A1Q96P44 957 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 BTBD9Q96Q07 612 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 KCNA7Q96RP8 456 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 TRIB1Q96RU8 372 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 GSTO2Q9H4Y5 243 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 CALHM2Q9HA72 323 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 GALNT9Q9HCQ5 603 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 MID1IP1Q9NPA3 183 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 SLC35C2Q9NQQ7 365 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 GIMAP4Q9NUV9 329 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 EHD3Q9NZN3 535 aa8.6□□□□□ -1.03
NUP50-205ENST00000419387 ARHGAP21Q5T5U3 1957 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 POLQO75417 2590 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 MBD3L4A6NDZ8 208 aaPredicted RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 MBD3L3A6NE82 208 aaPredicted RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 PRAMEF25A6NGN4 478 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 MBD3L5A6NJ08 208 aaPredicted RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 G3V2L1 256 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 UBFD1O14562 309 aaKnown RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 PLOD3O60568 738 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 TSPAN2O60636 221 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 GLRA3O75311 464 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 ERN1O75460 977 aaKnown RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 CTAG2O75638 210 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 ANXA4P09525 319 aaPredicted RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 MYL2P10916 166 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 CPN1P15169 458 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 UQCRC1P31930 480 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 GCKP35557 465 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 KRT20P35900 424 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 KIR2DL3P43628 341 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 SLCO1A2P46721 670 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 ASCL1P50553 236 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 ZNF136P52737 540 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 PNLIPRP2P54317 469 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 FOXA1P55317 472 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 NAA20P61599 178 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 PSPHP78330 225 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 C2orf80Q0P641 193 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 SNTB1Q13884 538 aaKnown RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 EFR3AQ14156 821 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 DCST1Q5T197 706 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 ZYG11AQ6WRX3 759 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 SPNS3Q6ZMD2 512 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 PLCZ1Q86YW0 608 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 FAM9CQ8IZT9 166 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 WDSUB1Q8N9V3 476 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 MBD3L2Q8NHZ7 208 aaPredicted RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 ZPLD1Q8TCW7 415 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 RNASE6Q93091 150 aaKnown RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 SLC35A4Q96G79 324 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 VSTM2LQ96N03 204 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 BBS4Q96RK4 519 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 ADOQ96SZ5 270 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 EBPLQ9BY08 206 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 SHCBP1LQ9BZQ2 653 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 OR2B2Q9GZK3 357 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 STMN4Q9H169 189 aaPredicted RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 ANKRA2Q9H9E1 313 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 FOLH1BQ9HBA9 442 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 SERHLQ9NQF3 203 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 TAS2R9Q9NYW1 312 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 LGALS13Q9UHV8 139 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 FOXD3Q9UJU5 478 aaPredicted RBP8.59□□□□□ -1.03
NUP50-205ENST00000419387 EMCNQ9ULC0 261 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 MAPRE3Q9UPY8 281 aa8.59□□□□□ -1.03
NUP50-205ENST00000419387 CCDC168Q8NDH2 2452 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 FAM221AA4D161 298 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 MYO1GB0I1T2 1018 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 H3BQF6 201 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 NME6O75414 186 aaPredicted RBP8.58□□□□□ -1.04
NUP50-205ENST00000419387 PROCP04070 461 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 CYP4B1P13584 511 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 CREB1P16220 341 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 DDCP20711 480 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 CTSSP25774 331 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 IL12BP29460 328 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 CCT5P48643 541 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 CORO7P57737 925 aa8.58□□□□□ -1.04
NUP50-205ENST00000419387 DNAJB13P59910 316 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms