RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TOR1AIP1Q5JTV8 583 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 C16orf62Q7Z3J2 963 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 MARCH9Q86YJ5 346 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 FLCNQ8NFG4 579 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 FAM83CQ9BQN1 747 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 PLEKHB1Q9UF11 243 aaPredicted RBP11.18□□□□□ -0.62
LIMK1-202ENST00000418310 NDRG2Q9UN36 371 aaKnown RBP11.18□□□□□ -0.62
LIMK1-202ENST00000418310 EDDM13A0A1B0GTR0 161 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 AIFM1O95831 613 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 LINC00271P0C7V0 271 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 SMSP52788 366 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 TAS2R38P59533 333 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 PCDH1Q08174 1060 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 GPR50Q13585 617 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 SLC27A4Q6P1M0 643 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 C19orf48Q6RUI8 117 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 NRMQ8IXM6 262 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 KCT2Q8NC54 265 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 OR51G2Q8NGK0 314 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 CCDC32Q9BV29 185 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 KATNB1Q9BVA0 655 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 EPHX3Q9H6B9 360 aa11.18□□□□□ -0.62
LIMK1-202ENST00000418310 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
LIMK1-202ENST00000418310 LRIT2A6NDA9 550 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SOCS6O14544 535 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SLC9A3R1O14745 358 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SLC30A4O14863 429 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SLC31A1O15431 190 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 PIPP12273 146 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 RGS8P57771 180 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 REEP5Q00765 189 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 KLHL12Q53G59 568 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SNAP47Q5SQN1 464 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 DDI2Q5TDH0 399 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 MEDAGQ5VYS4 303 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 PLEKHM3Q6ZWE6 761 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 KIAA0907Q7Z7F0 614 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF614Q8N883 585 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF557Q8N988 423 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 ACOT4Q8N9L9 421 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SLC25A46Q96AG3 418 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 QRFPRQ96P65 431 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 MRPS30Q9NP92 439 aaKnown RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 AP1M2Q9Y6Q5 423 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 ARID1BQ8NFD5 2236 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 KIAA1671Q9BY89 1806 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 TRIOO75962 3097 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 A0A075B6Q4 140 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 FAM25AB3EWG3 89 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 FAM25CB3EWG5 89 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 FAM25GB3EWG6 89 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 FAM47E-STBD1D6RA91 191 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 VEGFDO43915 354 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 MRPL3P09001 348 aaKnown RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 TRIM23P36406 574 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 INPP1P49441 399 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 KHKP50053 298 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SNRPD2P62316 118 aaKnown RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 BTN3A2P78410 334 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 NANOGNBQ7Z5D8 188 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 KLBQ86Z14 1044 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 CREB3L4Q8TEY5 395 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 TMEM255BQ8WV15 326 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 UFD1Q92890 307 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 ST6GAL2Q96JF0 529 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 WDR26Q9H7D7 661 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 NLKQ9UBE8 527 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 GPR34Q9UPC5 381 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SPTBP11277 2137 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 MTCL1Q9Y4B5 1905 aaKnown RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 CENPVL1A0A0U1RR11 272 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 C17orf113A0A1B0GUU1 675 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SHISA3A0PJX4 238 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 A8MVJ9 347 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 GKN3PP0CG01 181 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 AHRP35869 848 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 EPHA5P54756 1037 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SMIM11AP58511 58 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 LRRC32Q14392 662 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 GPR68Q15743 365 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 FAM78AQ5JUQ0 283 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 TRIQKQ629K1 86 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF57Q68EA5 555 aaPredicted RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 CNIH2Q6PI25 160 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 MORN4Q8NDC4 146 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 NUP43Q8NFH3 380 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 OR4E2Q8NGC2 313 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 OR2A1Q8NGT9 310 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 CHAC2Q8WUX2 184 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 OR7D2Q96RA2 312 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 SECISBP2Q96T21 854 aaKnown RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 POLDIP3Q9BY77 421 aaKnown RBP11.17□□□□□ -0.62
LIMK1-202ENST00000418310 C3orf14Q9HBI5 128 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 CA5BQ9Y2D0 317 aa11.17□□□□□ -0.62
LIMK1-202ENST00000418310 A0A1W2PRQ8 180 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 GUCY1B2O75343 617 aa11.16□□□□□ -0.62
LIMK1-202ENST00000418310 MYL9P24844 172 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms