RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 FREM3P0C091 2139 aa14.02□□□□□ -0.17
NUP50-204ENST00000417702 C15orf38-AP3S2A0A0A6YYH1 394 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 PRAMEF25A6NGN4 478 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 TMEM233B4DJY2 109 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 PLOD2O00469 737 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 TYROBPO43914 113 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 ICOSLGO75144 302 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 NME6O75414 186 aaPredicted RBP14.01□□□□□ -0.17
NUP50-204ENST00000417702 HPNP05981 417 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 BPGMP07738 259 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 CT45A8P0DMV1 189 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 CT45A9P0DMV2 189 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 CREB1P16220 341 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 ENDOUP21128 410 aaKnown RBP14.01□□□□□ -0.17
NUP50-204ENST00000417702 TACR1P25103 407 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 IL12BP29460 328 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 MC3RP41968 323 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 NUP107P57740 925 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 MRPS22P82650 360 aaKnown RBP14.01□□□□□ -0.17
NUP50-204ENST00000417702 EFR3AQ14156 821 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 GALNTL6Q49A17 601 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 CT45A2Q5DJT8 189 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 C1orf185Q5T7R7 199 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 FNDC7Q5VTL7 733 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 DESI1Q6ICB0 168 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 TMEM107Q6UX40 140 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 LARP4Q71RC2 724 aaKnown RBP eCLIP14.01□□□□□ -0.17
NUP50-204ENST00000417702 NUDCD3Q8IVD9 361 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 RPRMLQ8N4K4 120 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 OR10Q1Q8NGQ4 319 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 AGR3Q8TD06 166 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 GFM2Q969S9 779 aaKnown RBP14.01□□□□□ -0.17
NUP50-204ENST00000417702 PPCDCQ96CD2 204 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 SLC35A4Q96G79 324 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 FCRL1Q96LA6 429 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 PPP3R2Q96LZ3 170 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 AMDHD1Q96NU7 426 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 TSSK3Q96PN8 268 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 ADOQ96SZ5 270 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 UBQLN3Q9H347 655 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 C19orf53Q9UNZ5 99 aaPredicted RBP14.01□□□□□ -0.17
NUP50-204ENST00000417702 RNF6Q9Y252 685 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 PCDHGB3Q9Y5G1 929 aa14.01□□□□□ -0.17
NUP50-204ENST00000417702 FAM47E-STBD1D6RA91 191 aa14□□□□□ -0.17
NUP50-204ENST00000417702 PIP5K1BO14986 540 aa14□□□□□ -0.17
NUP50-204ENST00000417702 SNPHO15079 494 aa14□□□□□ -0.17
NUP50-204ENST00000417702 LSM1O15116 133 aaKnown RBP14□□□□□ -0.17
NUP50-204ENST00000417702 PDPK1O15530 556 aa14□□□□□ -0.17
NUP50-204ENST00000417702 AKAP10O43572 662 aa14□□□□□ -0.17
NUP50-204ENST00000417702 SNRPB2P08579 225 aaKnown RBP14□□□□□ -0.17
NUP50-204ENST00000417702 DDX5P17844 614 aaKnown RBP14□□□□□ -0.17
NUP50-204ENST00000417702 SDC1P18827 310 aa14□□□□□ -0.17
NUP50-204ENST00000417702 MAPK1P28482 360 aa14□□□□□ -0.17
NUP50-204ENST00000417702 PTGER4P35408 488 aa14□□□□□ -0.17
NUP50-204ENST00000417702 GCKP35557 465 aa14□□□□□ -0.17
NUP50-204ENST00000417702 ASMTP46597 345 aa14□□□□□ -0.17
NUP50-204ENST00000417702 ZNHIT3Q15649 155 aaPredicted RBP14□□□□□ -0.17
NUP50-204ENST00000417702 UGT3A2Q3SY77 523 aa14□□□□□ -0.17
NUP50-204ENST00000417702 RFTN2Q52LD8 501 aaPredicted RBP14□□□□□ -0.17
NUP50-204ENST00000417702 NPSR1Q6W5P4 371 aa14□□□□□ -0.17
NUP50-204ENST00000417702 LILRB4Q8NHJ6 448 aa14□□□□□ -0.17
NUP50-204ENST00000417702 ZFP28Q8NHY6 868 aa14□□□□□ -0.17
NUP50-204ENST00000417702 ELP4Q96EB1 424 aa14□□□□□ -0.17
NUP50-204ENST00000417702 DTNBP1Q96EV8 351 aa14□□□□□ -0.17
NUP50-204ENST00000417702 PGM2Q96G03 612 aa14□□□□□ -0.17
NUP50-204ENST00000417702 ZNF764Q96H86 408 aaPredicted RBP14□□□□□ -0.17
NUP50-204ENST00000417702 TTYH2Q9BSA4 534 aa14□□□□□ -0.17
NUP50-204ENST00000417702 REEP4Q9H6H4 257 aa14□□□□□ -0.17
NUP50-204ENST00000417702 GALNT9Q9HCQ5 603 aa14□□□□□ -0.17
NUP50-204ENST00000417702 SH3BP4Q9P0V3 963 aa14□□□□□ -0.17
NUP50-204ENST00000417702 FAM215AQ9Y5M1 114 aa14□□□□□ -0.17
NUP50-204ENST00000417702 PHF3Q92576 2039 aaKnown RBP14□□□□□ -0.17
NUP50-204ENST00000417702 EXPH5Q8NEV8 1989 aa14□□□□□ -0.17
NUP50-204ENST00000417702 ITPR2Q14571 2701 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 C2orf72A6NCS6 295 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 TMEM114B3SHH9 223 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 UPK1AO00322 258 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 TSPAN2O60636 221 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 IFI6P09912 130 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 GLI4P10075 376 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 PTPN6P29350 595 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 GPC1P35052 558 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 PTGDSP41222 190 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 ETV4P43268 484 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 SERPINB4P48594 390 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 PNLIPRP2P54317 469 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 HSPB3Q12988 150 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 CASP8Q14790 479 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 CYP27C1Q4G0S4 372 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 ATP6AP1LQ52LC2 224 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 RTL6Q6ICC9 239 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 ANKRD26P1Q6NSI1 321 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 ZNF551Q7Z340 670 aaPredicted RBP13.99□□□□□ -0.17
NUP50-204ENST00000417702 R3HCC1LQ7Z5L2 792 aaKnown RBP13.99□□□□□ -0.17
NUP50-204ENST00000417702 CCDC71Q8IV32 467 aaPredicted RBP13.99□□□□□ -0.17
NUP50-204ENST00000417702 MCEMP1Q8IX19 187 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 OR2L13Q8N349 312 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 CLHC1Q8NHS4 586 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 NTNG2Q96CW9 530 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 ZBED6CLQ96FA7 236 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms