RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CRIPAKQ8N1N5 446 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 C9orf62Q8N4C0 152 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 OR11H7Q8NGC8 314 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 OR51G2Q8NGK0 314 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 FCRL4Q96PJ5 515 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 CXXC1Q9P0U4 656 aaPredicted RBP13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 SPEF1Q9Y4P9 236 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 CDH10Q9Y6N8 788 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 FAM170BA6NMN3 283 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 FOXE1O00358 373 aaPredicted RBP13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 LCMT2O60294 686 aaKnown RBP13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 ACP5P13686 325 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 LIPIQ6XZB0 460 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 CCDC28AQ8IWP9 274 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 LRRC56Q8IYG6 542 aaPredicted RBP13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 GPR135Q8IZ08 494 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 TBC1D19Q8N5T2 526 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 TRAM1L1Q8N609 369 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 TMEM163Q8TC26 289 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 CXorf40BQ96DE9 158 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 MED30Q96HR3 178 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 SECISBP2Q96T21 854 aaKnown RBP13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 C17orf62Q9BQA9 187 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 ARHGAP9Q9BRR9 750 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 EFCAB11Q9BUY7 163 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 A4GALTQ9NPC4 353 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 NUDT15Q9NV35 164 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 GSTK1Q9Y2Q3 226 aa13.71□□□□□ -0.21
SEMA3F-202ENST00000413852 POP7O75817 140 aaKnown RBP13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 LGI1O95970 557 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 RB1P06400 928 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 MRPL3P09001 348 aaKnown RBP13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 TYRP14679 529 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 AHRP35869 848 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 TNK1Q13470 666 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 TPBGQ13641 420 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 KLHL22Q53GT1 634 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 PRAMEF14Q5SWL7 426 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 PRAMEF13Q5VWM6 474 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 RAET1GQ6H3X3 334 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 MZT2BQ6NZ67 158 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 RPTNQ6XPR3 784 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 HTR3DQ70Z44 454 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 GLRX5Q86SX6 157 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 SHISA5Q8N114 240 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 SIRT6Q8N6T7 355 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 OR13C5Q8NGS8 318 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 HSD17B8Q92506 261 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 MAGEB10Q96LZ2 347 aaPredicted RBP13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 TMEM245Q9H330 911 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 GLIPR2Q9H4G4 154 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 XKR8Q9H6D3 395 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 STMN3Q9NZ72 180 aa13.71□□□□□ -0.22
SEMA3F-202ENST00000413852 ARRDC5A6NEK1 342 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 E9PI62 339 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 TEX46H3BTG2 121 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 CD3GP09693 182 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 BSGP35613 385 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 PPP3R1P63098 170 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 MAB21L1Q13394 359 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 IZUMO1Q8IYV9 350 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 CCDC116Q8IYX3 515 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 POF1BQ8WVV4 589 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 RASSF5Q8WWW0 418 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 GCDHQ92947 438 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SOSTQ9BQB4 213 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 KLHL31Q9H511 634 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 CCDC86Q9H6F5 360 aaKnown RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF624Q9P2J8 865 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SLC23A2Q9UGH3 650 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 KLHL21Q9UJP4 597 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 WNT6Q9Y6F9 365 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 BTN3A3O00478 584 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 PGRMC2O15173 223 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 GRM6O15303 877 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SEC14L5O43304 696 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 MMP20O60882 483 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 PDE9AO76083 593 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 GABRA5P31644 462 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 CCR6P51684 374 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 POLR2LP62875 67 aaKnown RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 POU6F2P78424 691 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 EFNB1P98172 346 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SFTPA1Q8IWL2 248 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SAMD12Q8N8I0 201 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 TEX47Q8TBZ9 253 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 TEFMQ96QE5 360 aaKnown RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 DPCDQ9BVM2 203 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 C6orf106Q9H6K1 298 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 PTGFRNQ9P2B2 879 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SCN2AQ99250 2005 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 SCN3AQ9NY46 2000 aa13.7□□□□□ -0.22
SEMA3F-202ENST00000413852 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
SEMA3F-202ENST00000413852 REM1O75628 298 aa13.69□□□□□ -0.22
SEMA3F-202ENST00000413852 OLFM2O95897 454 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms