RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TYROBPO43914 113 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 PLOD3O60568 738 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 SKAP2O75563 359 aaPredicted RBP9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 LYPLA1O75608 230 aaPredicted RBP9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 FGF4P08620 206 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 GLI4P10075 376 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 SDC1P18827 310 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 IL12BP29460 328 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 NTSP30990 170 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 GPC1P35052 558 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 GSTM5P46439 218 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 CDK9P50750 372 aaKnown RBP9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 HSPB3Q12988 150 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 GAB1Q13480 694 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF385BQ569K4 471 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 CEP85LQ5SZL2 805 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 C1orf185Q5T7R7 199 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 CES4AQ5XG92 561 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 TIGD3Q6B0B8 471 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 B3GNT6Q6ZMB0 384 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 LARP4Q71RC2 724 aaKnown RBP eCLIP9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 EXOC3L1Q86VI1 746 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 MREGQ8N565 214 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 PPCDCQ96CD2 204 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 TMCO6Q96DC7 493 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 ELP4Q96EB1 424 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 TMEM41AQ96HV5 264 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 C3orf30Q96M34 536 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 VSTM2LQ96N03 204 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 TIMP4Q99727 224 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 TMEM109Q9BVC6 243 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 OSBPL11Q9BXB4 747 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 REEP4Q9H6H4 257 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 KCNK9Q9NPC2 374 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 EQTNQ9NQ60 294 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 SERHLQ9NQF3 203 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 DDX18Q9NVP1 670 aaKnown RBP9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 TAS2R9Q9NYW1 312 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 C15orf41Q9Y2V0 281 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 FAM215AQ9Y5M1 114 aa9.3□□□□□ -0.92
NCKIPSD-202ENST00000413374 MYO7BQ6PIF6 2116 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 FIGNL2A6NMB9 653 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 PDPK1O15530 556 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 TSPAN2O60636 221 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 COQ9O75208 318 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 BCKDHAP12694 445 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 CYP4B1P13584 511 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 BMP7P18075 431 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 PRPH2P23942 346 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 PTPN6P29350 595 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 CHRNB4P30926 498 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 ADH7P40394 386 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 ETV4P43268 484 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 MANFP55145 182 aaKnown RBP9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 PSG6Q00889 435 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 CHI3L2Q15782 390 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 SLC30A6Q6NXT4 461 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 IKBIPQ70UQ0 350 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 SZRD1Q7Z422 152 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 GALNT10Q86SR1 603 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 LIX1LQ8IVB5 337 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 ULK2Q8IYT8 1036 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 WDSUB1Q8N9V3 476 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 FAM83FQ8NEG4 500 aaPredicted RBP9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 LILRB4Q8NHJ6 448 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 FBXO30Q8TB52 745 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 ASB5Q8WWX0 329 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 ERP27Q96DN0 273 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 OTUB1Q96FW1 271 aaPredicted RBP9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZIM3Q96PE6 472 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 BTBD9Q96Q07 612 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 PAIP2Q9BPZ3 127 aaKnown RBP9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 C1orf50Q9BV19 199 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 STMN4Q9H169 189 aaPredicted RBP9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 QPCTLQ9NXS2 382 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 TAS2R7Q9NYW3 318 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 FLRT3Q9NZU0 649 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 RAB21Q9UL25 225 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 C19orf53Q9UNZ5 99 aaPredicted RBP9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 CAMK2AQ9UQM7 478 aa9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 WBP11Q9Y2W2 641 aaKnown RBP9.29□□□□□ -0.92
NCKIPSD-202ENST00000413374 A0A087WV62 115 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 A0A0G2JNJ9 132 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 GXYLT2A0PJZ3 443 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 OR6C70A6NIJ9 312 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 PLOD2O00469 737 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 SNPHO15079 494 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 SCO2O43819 266 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 GMFGO60234 142 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 WDR1O75083 606 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 CBR3O75828 277 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 HSPA4LO95757 839 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 HPNP05981 417 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 NEFHP12036 1026 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 GABRA3P34903 492 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 SERPINB4P48594 390 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 STARP49675 285 aa9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 AGFG1P52594 562 aaKnown RBP9.28□□□□□ -0.92
NCKIPSD-202ENST00000413374 SRYQ05066 204 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms