RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ANKRD53Q8N9V6 530 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 OR5D16Q8NGK9 328 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 UCN3Q969E3 161 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 MRGPRX3Q96LB0 322 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 SLC46A2Q9BY10 475 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 PITHD1Q9GZP4 211 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-202ENST00000413219 LHX9Q9NQ69 397 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 WASH6PQ9NQA3 447 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 CYSLTR2Q9NS75 346 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 C5AR2Q9P296 337 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 SLC23A1Q9UHI7 598 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 ING4Q9UNL4 249 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 NCKAP1Q9Y2A7 1128 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 LINC00862A6NCI5 91 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 ZSCAN5BA6NJL1 495 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 SMLR1H3BR10 107 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 SYT5O00445 386 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 ELK1P19419 428 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 NNMTP40261 264 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 TRAM2Q15035 370 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 SPOUT1Q5T280 376 aaKnown RBP16.57■□□□□ 0.24
SDCBP-202ENST00000413219 HACD4Q5VWC8 232 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 KIAA0907Q7Z7F0 614 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-202ENST00000413219 LRRC28Q86X40 367 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-202ENST00000413219 VN1R2Q8NFZ6 395 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 OR5M3Q8NGP4 307 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 OSTF1Q92882 214 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 RGMAQ96B86 450 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 KCTD12Q96CX2 325 aaKnown RBP16.57■□□□□ 0.24
SDCBP-202ENST00000413219 IL17FQ96PD4 163 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 PRR14Q9BWN1 585 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 KCNN2Q9H2S1 579 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 KCNK12Q9HB15 430 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 EMC7Q9NPA0 242 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 RNF186Q9NXI6 227 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 EXTL2Q9UBQ6 330 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 MTCL1Q9Y4B5 1905 aaKnown RBP16.56■□□□□ 0.24
SDCBP-202ENST00000413219 LOC105371267A0A1B0GV96 52 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 A0A1W2PRU2 124 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 C7orf66A4D0T2 115 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 AGRPO00253 132 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 CHP2O43745 196 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 TMPRSS11DO60235 418 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 ALDH1A1P00352 501 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 CHRM4P08173 479 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 ERGP11308 486 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 ACP5P13686 325 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 DRD2P14416 443 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 BUD31P41223 144 aaPredicted RBP16.56■□□□□ 0.24
SDCBP-202ENST00000413219 STAT5AP42229 794 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 TM4SF4P48230 202 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 CAP1Q01518 475 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 WDR45BQ5MNZ6 344 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 VASNQ6EMK4 673 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 ANKRD54Q6NXT1 300 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 TMEM64Q6YI46 380 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 TMEM91Q6ZNR0 172 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 ZNF765Q7L2R6 523 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 OR4F15Q8NGB8 312 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 OR2L2Q8NH16 312 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 AUTS2Q8WXX7 1259 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 AMDHD1Q96NU7 426 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 HDHD2Q9H0R4 259 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 GLIPR2Q9H4G4 154 aa16.56■□□□□ 0.24
SDCBP-202ENST00000413219 RANBP3Q9H6Z4 567 aaPredicted RBP16.56■□□□□ 0.24
SDCBP-202ENST00000413219 ZCCHC3Q9NUD5 404 aaKnown RBP16.56■□□□□ 0.24
SDCBP-202ENST00000413219 ELF5Q9UKW6 265 aaPredicted RBP16.56■□□□□ 0.24
SDCBP-202ENST00000413219 TEX51A0A1B0GUA7 166 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 SURF4O15260 269 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 NDUFS4O43181 175 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 RGS9O75916 674 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 DHFRP00374 187 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 HTR1FP30939 366 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 UQCRC1P31930 480 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 RFX3P48380 749 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 RNF144AP50876 292 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 TAS2R41P59536 307 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 REEP5Q00765 189 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 CSTF1Q05048 431 aaKnown RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 ARHGAP19Q14CB8 494 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 TMEM215Q68D42 235 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 HBMQ6B0K9 141 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 IDO2Q6ZQW0 420 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 LRRC17Q8N6Y2 441 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 PIGXQ8TBF5 258 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 SFXN5Q8TD22 340 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 SPRYD4Q8WW59 207 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 IRF7Q92985 503 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 RFT1Q96AA3 541 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 MED28Q9H204 178 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 TEX10Q9NXF1 929 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 GPR34Q9UPC5 381 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 AUP1Q9Y679 476 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 CENPFP49454 3210 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 CD8B2A6NJW9 211 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 B8ZZF3 427 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 NRG2O14511 850 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 FABP7O15540 132 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms