RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SNX31Q8N9S9 440 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 TTC29Q8NA56 475 aaPredicted RBP4.97□□□□□ -1.61
LINC00342-201ENST00000412393 TRPV3Q8NET8 790 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 FDCSPQ8NFU4 85 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 OR2Y1Q8NGV0 311 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 GABPB2Q8TAK5 448 aaPredicted RBP4.97□□□□□ -1.61
LINC00342-201ENST00000412393 SMPDL3AQ92484 453 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 FKBP10Q96AY3 582 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 PTERQ96BW5 349 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 CCDC126Q96EE4 140 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 CENPNQ96H22 339 aaPredicted RBP4.97□□□□□ -1.61
LINC00342-201ENST00000412393 FER1L6-AS2Q96M78 137 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 ZNF285Q96NJ3 590 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 OR52B2Q96RD2 323 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 PKP4Q99569 1192 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 GPR21Q99679 349 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 RBBP8Q99708 897 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 SLC29A1Q99808 456 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 DPH7Q9BTV6 452 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 TRMOQ9BU70 441 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 C9orf16Q9BUW7 83 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 ACAT2Q9BWD1 397 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 GATA5Q9BWX5 397 aaPredicted RBP4.97□□□□□ -1.61
LINC00342-201ENST00000412393 MRPL46Q9H2W6 279 aaKnown RBP4.97□□□□□ -1.61
LINC00342-201ENST00000412393 NANOGQ9H9S0 305 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 AGPAT4Q9NRZ5 378 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 SLC22A11Q9NSA0 550 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 CUTCQ9NTM9 273 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 GPR83Q9NYM4 423 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 SELENONQ9NZV5 590 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 ACTR3BQ9P1U1 418 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 KLHL42Q9P2K6 505 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 ABCD2Q9UBJ2 740 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 MARCOQ9UEW3 520 aaPredicted RBP4.97□□□□□ -1.61
LINC00342-201ENST00000412393 FBXO5Q9UKT4 447 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 CARD8Q9Y2G2 431 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 DHRS7Q9Y394 339 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 NAALAD2Q9Y3Q0 740 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 KLK4Q9Y5K2 254 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 COMMD10Q9Y6G5 202 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 A3GALT2U3KPV4 340 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 SVILO95425 2214 aa4.97□□□□□ -1.61
LINC00342-201ENST00000412393 TENM4Q6N022 2769 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 LOC105369274A0A096LPK9 316 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 LOC102723532A0A0G2JNH3 316 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 HYKKA2RU49 373 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 OR2A25A4D2G3 310 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CLDN25C9JDP6 229 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 BOLA2-SMG1P6H3BVE0 249 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 GFYI3L273 518 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 K7EPI3 171 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 EIF3FO00303 357 aaPredicted RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 AIM2O14862 343 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 B3GALT2O43825 422 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 NRP2O60462 931 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 DLX3O60479 287 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 DPM1O60762 260 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 VPS26AO75436 327 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 PIAS1O75925 651 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CCNDBP1O95273 360 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 HSPA4LO95757 839 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 SLC16A8O95907 504 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 UMODP07911 640 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 FGF4P08620 206 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 GSTT2P0CG29 244 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 GSTT2BP0CG30 244 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ERVK-10P10266 1014 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ENO3P13929 434 aaPredicted RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CCNA2P20248 432 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 GSTM2P28161 218 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 HSD17B2P37059 387 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 SLC26A3P40879 764 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 OR1D4P47884 311 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 RGS4P49798 205 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 NUDT2P50583 147 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 PNLIPRP1P54315 467 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 FOXL2P58012 376 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 GABARAPL2P60520 117 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 TUBA1BP68363 451 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 PRDX1Q06830 199 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 RIPPLY1Q0D2K3 151 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 RAPSNQ13702 412 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ARHGAP19Q14CB8 494 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ATP6AP1Q15904 470 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 RABL3Q5HYI8 236 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 DCAF10Q5QP82 559 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 RBM48Q5RL73 367 aaKnown RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 KANK2Q63ZY3 851 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 FAAH2Q6GMR7 532 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 FRMPD2BQ6IN97 320 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 HMBOX1Q6NT76 420 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 UGT3A1Q6NUS8 523 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 FBXO42Q6P3S6 717 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 TTC33Q6PID6 262 aaPredicted RBP4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF773Q6PK81 442 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 CYHR1Q6ZMK1 362 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 Q6ZRM9 215 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 ZCCHC23Q6ZST2 131 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 TUBA1AQ71U36 451 aa4.96□□□□□ -1.62
LINC00342-201ENST00000412393 COX15Q7KZN9 410 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms