RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 MRPL19P49406 292 aaKnown RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 TMED10P49755 219 aaKnown RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 CLNS1AP54105 237 aaKnown RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 AQP5P55064 265 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 NME5P56597 212 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 PSPHP78330 225 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 PLCXD2Q0VAA5 305 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 HYAL4Q2M3T9 481 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 DPY19L1Q2PZI1 675 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 PGS1Q32NB8 556 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 PDCD4Q53EL6 469 aaKnown RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 PRAMEF20Q5VT98 475 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 BICRALQ6AI39 1079 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 NXNQ6DKJ4 435 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 MFSD12Q6NUT3 480 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 CLEC18BQ6UXF7 455 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 SLC44A2Q8IWA5 706 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 CHERPQ8IWX8 916 aaKnown RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 ARFGAP2Q8N6H7 521 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 CLEC18CQ8NCF0 446 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 FAM13CQ8NE31 585 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 NUP43Q8NFH3 380 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 OR5M3Q8NGP4 307 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 GPR137Q96N19 417 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 MS4A4EQ96PG1 132 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 NODALQ96S42 347 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 FAM173AQ9BQD7 235 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 NEUROD4Q9HD90 331 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 TCF7L2Q9NQB0 619 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 SDR39U1Q9NRG7 319 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 TUBA8Q9NY65 449 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 CNIH4Q9P003 139 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 NINQ8N4C6 2090 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 RP1L1Q8IWN7 2480 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ANKUB1A6NFN9 424 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 OR6C70A6NIJ9 312 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 TP53I11O14683 189 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 TRIM3O75382 744 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-210ENST00000412342 P04436 131 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ACP2P11117 423 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ZNF24P17028 368 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 CASP3P42574 277 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ALDH6A1Q02252 535 aaKnown RBP12.08□□□□□ -0.48
HDAC8-210ENST00000412342 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC8-210ENST00000412342 GAB1Q13480 694 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 GSTA3Q16772 222 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 FAM174BQ3ZCQ3 159 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 HSP90B2PQ58FF3 399 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 FNDC7Q5VTL7 733 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 GK5Q6ZS86 529 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 NUP54Q7Z3B4 507 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 SFXN5Q8TD22 340 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 C16orf58Q96GQ5 468 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 CCDC28BQ9BUN5 200 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ANGPTL4Q9BY76 406 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 TTTY12Q9BZ98 90 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 TSPAN10Q9H1Z9 355 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-210ENST00000412342 CCDC134Q9H6E4 229 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 EQTNQ9NQ60 294 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ZCCHC3Q9NUD5 404 aaKnown RBP12.08□□□□□ -0.48
HDAC8-210ENST00000412342 GPATCH2Q9NW75 528 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ZIM2Q9NZV7 527 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 ESPL1Q14674 2120 aa12.08□□□□□ -0.48
HDAC8-210ENST00000412342 PRSS51A0A1B0GVH4 220 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 GXYLT2A0PJZ3 443 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 TTC36A6NLP5 189 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 UBDO15205 165 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 POLR3GO15318 223 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-210ENST00000412342 HMGN2P05204 90 aaKnown RBP12.07□□□□□ -0.48
HDAC8-210ENST00000412342 CCT3P49368 545 aaKnown RBP12.07□□□□□ -0.48
HDAC8-210ENST00000412342 MAN2A2P49641 1150 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 DGKQP52824 942 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 PNLIPRP2P54317 469 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 PRR5P85299 388 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 GUCY1A3Q02108 690 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 DUSP5Q16690 384 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 CYP27C1Q4G0S4 372 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 CMPK2Q5EBM0 449 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 TBCELQ5QJ74 424 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 CGB2Q6NT52 195 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 ZCCHC12Q6PEW1 402 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 ACAD11Q709F0 780 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 ANKRD46Q86W74 232 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 CDRT4Q8N9R6 151 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 GLB1L3Q8NCI6 653 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-210ENST00000412342 SLC16A11Q8NCK7 471 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 OR9I1Q8NGQ6 314 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 GOT1L1Q8NHS2 421 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-210ENST00000412342 RFWD2Q8NHY2 731 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 DIO2Q92813 273 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 CCDC115Q96NT0 180 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 COL21A1Q96P44 957 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 SERHL2Q9H4I8 314 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 ZDHHC11Q9H8X9 412 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 IL1RL2Q9HB29 575 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 C3orf14Q9HBI5 128 aa12.07□□□□□ -0.48
HDAC8-210ENST00000412342 FAM120CQ9NX05 1096 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms