RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 C12orf73Q69YU5 71 aa22.95■■□□□ 1.26
VRK2-202ENST00000412104 B3GNT7Q8NFL0 401 aa22.95■■□□□ 1.26
VRK2-202ENST00000412104 OR52P1PQ8NH57 321 aa22.95■■□□□ 1.26
VRK2-202ENST00000412104 DOK4Q8TEW6 326 aa22.95■■□□□ 1.26
VRK2-202ENST00000412104 PRR14Q9BWN1 585 aa22.95■■□□□ 1.26
VRK2-202ENST00000412104 TRIM45Q9H8W5 580 aaPredicted RBP22.95■■□□□ 1.26
VRK2-202ENST00000412104 SGK494L7N484 410 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 SLC22A1O15245 554 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 LSM11P83369 360 aaKnown RBP eCLIP22.94■■□□□ 1.26
VRK2-202ENST00000412104 SMAD2Q15796 467 aaKnown RBP22.94■■□□□ 1.26
VRK2-202ENST00000412104 ARHGAP11BQ3KRB8 267 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 CD300LDQ6UXZ3 194 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 ZBTB46Q86UZ6 589 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 C19orf47Q8N9M1 422 aaKnown RBP22.94■■□□□ 1.26
VRK2-202ENST00000412104 NECTIN3Q9NQS3 549 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.94■■□□□ 1.26
VRK2-202ENST00000412104 TMEM265A0A087WTH1 108 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 KRBA1A5PL33 1030 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 GPR75O95800 540 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 CTSBP07858 339 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 CDH3P22223 829 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 CD27P26842 260 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 ALDH6A1Q02252 535 aaKnown RBP22.94■■□□□ 1.26
VRK2-202ENST00000412104 FZD5Q13467 585 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 NDUFA9Q16795 377 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 TYW3Q6IPR3 259 aaKnown RBP22.94■■□□□ 1.26
VRK2-202ENST00000412104 C1orf94Q6P1W5 598 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 NR4A3Q92570 626 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 IL4I1Q96RQ9 567 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 PLGRKTQ9HBL7 147 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 ADAP2Q9NPF8 381 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 WDR45Q9Y484 360 aa22.94■■□□□ 1.26
VRK2-202ENST00000412104 CLPXO76031 633 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 CSF2P04141 144 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 INHBBP09529 407 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 AVPR1BP47901 424 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 SNRPGP62308 76 aaKnown RBP22.93■■□□□ 1.26
VRK2-202ENST00000412104 LSM3P62310 102 aaKnown RBP22.93■■□□□ 1.26
VRK2-202ENST00000412104 OCA2Q04671 838 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 COX10Q12887 443 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 UBXN2BQ14CS0 331 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 CLIP4Q8N3C7 705 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 DIO2Q92813 273 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 KLHL28Q9NXS3 571 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 CNOT2Q9NZN8 540 aaKnown RBP22.93■■□□□ 1.26
VRK2-202ENST00000412104 ZNF443Q9Y2A4 671 aaPredicted RBP22.93■■□□□ 1.26
VRK2-202ENST00000412104 TMEM131Q92545 1883 aa22.93■■□□□ 1.26
VRK2-202ENST00000412104 A0A087WV62 115 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 EFCAB10A6NFE3 127 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 CPSF4LA6NMK7 179 aaKnown RBP22.92■■□□□ 1.26
VRK2-202ENST00000412104 RDH16O75452 317 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 UBXN7O94888 489 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 CD36P16671 472 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 TNNI3P19429 210 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 NT5EP21589 574 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 MLLT10P55197 1068 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 RAB38P57729 211 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 PUS10Q3MIT2 529 aaKnown RBP22.92■■□□□ 1.26
VRK2-202ENST00000412104 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.92■■□□□ 1.26
VRK2-202ENST00000412104 CASP12Q6UXS9 341 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 GJD3Q8N144 294 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 ARHGEF39Q8N4T4 335 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 AVL9Q8NBF6 648 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 NDNFQ8TB73 568 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 GPA33Q99795 319 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 PIGUQ9H490 435 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 MTHFD2LQ9H903 347 aaPredicted RBP22.92■■□□□ 1.26
VRK2-202ENST00000412104 SEMA4GQ9NTN9 838 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 CLCA2Q9UQC9 943 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 A0A1W2PR77 199 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 METTL12A8MUP2 240 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 M0R082 166 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 CYP7B1O75881 506 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 ADORA3P0DMS8 318 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 NME1P15531 152 aaKnown RBP22.92■■□□□ 1.26
VRK2-202ENST00000412104 CD38P28907 300 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 ALDH4A1P30038 563 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 TRHRP34981 398 aaPredicted RBP22.92■■□□□ 1.26
VRK2-202ENST00000412104 LIPAP38571 399 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 IRF3Q14653 427 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 ELOCQ15369 112 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 EXOSC6Q5RKV6 272 aaKnown RBP22.92■■□□□ 1.26
VRK2-202ENST00000412104 ZNF675Q8TD23 568 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 SLC38A4Q969I6 547 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 ANKHQ9HCJ1 492 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 IFT52Q9Y366 437 aa22.92■■□□□ 1.26
VRK2-202ENST00000412104 A0A087WUU8 490 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 CLDN24A6NM45 220 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 PLOD3O60568 738 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 ENTPD6O75354 484 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 CCNYL3P0C7X3 344 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 RGS8P57771 180 aaPredicted RBP22.91■■□□□ 1.26
VRK2-202ENST00000412104 VBP1P61758 197 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 TRAM2Q15035 370 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 MOGQ16653 247 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 SYT16Q17RD7 645 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 TIGD6Q17RP2 521 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 PRICKLE4Q2TBC4 344 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 CCNJQ5T5M9 372 aa22.91■■□□□ 1.26
VRK2-202ENST00000412104 PEX5LQ8IYB4 626 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms