RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MYL12AP19105 171 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 PPP2CBP62714 309 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 PPP2CAP67775 309 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 CD83Q01151 205 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 RBBP4Q09028 425 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 SHHQ15465 462 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 SHISA6Q6ZSJ9 500 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 ZBED6CLQ96FA7 236 aaPredicted RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 TMEM80Q96HE8 168 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 TREX2Q9BQ50 279 aaPredicted RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 ANKHQ9HCJ1 492 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 PLCXD1Q9NUJ7 323 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 SOHLH2Q9NX45 425 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 USP36Q9P275 1121 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 ANAPC1Q9H1A4 1944 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 FFAR1O14842 300 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 PLD2O14939 933 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 OR10H2O60403 315 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 RNGTTO60942 597 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 CSO75390 466 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 EML2O95834 649 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 IFNA8P32881 189 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 RORCP51449 518 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 STXBP1P61764 594 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 CHRNEQ04844 493 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF91Q05481 1191 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 KRR1Q13601 381 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 SMAD2Q15796 467 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 MINDY4Q4G0A6 757 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 PIP5KL1Q5T9C9 394 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 FAM71E1Q6IPT2 247 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 FAM111BQ6SJ93 734 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 RAB43Q86YS6 212 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 SYT14Q8NB59 555 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 OR4K5Q8NGD3 323 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 C9orf43Q8TAL5 461 aaPredicted RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 FOXN4Q96NZ1 517 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 OPALINQ96PE5 141 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF607Q96SK3 696 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 RACGAP1Q9H0H5 632 aa12.61□□□□□ -0.39
COL6A2-204ENST00000409416 TCF20Q9UGU0 1960 aaKnown RBP12.61□□□□□ -0.39
COL6A2-204ENST00000409416 A0A1W2PQ09 198 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 ANKRD34BA5PLL1 514 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 MRPS14O60783 128 aaKnown RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 MYF5P13349 255 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 RPL3P39023 403 aaKnown RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 VSX2P58304 361 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 PRKCDQ05655 676 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CAMK2BQ13554 666 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CRIPAKQ8N1N5 446 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 FCRL1Q96LA6 429 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 TOX2Q96NM4 488 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CAMK1GQ96NX5 476 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 ENOPH1Q9UHY7 261 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CYP8B1Q9UNU6 501 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 FAM170BA6NMN3 283 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 NPC1O15118 1278 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 GNRH1P01148 92 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 UQCRC2P22695 453 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 FOXL2P58012 376 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 TBRG1Q3YBR2 411 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 TUBA3EQ6PEY2 450 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 RFPL4BQ6ZWI9 263 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF438Q7Z4V0 828 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 KIAA1958Q8N8K9 716 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 ATP6V1C2Q8NEY4 427 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 OR51G2Q8NGK0 314 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 OR6T1Q8NGN1 323 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 OR5M3Q8NGP4 307 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 HHIPQ96QV1 700 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 SIGLEC11Q96RL6 698 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 SLC17A9Q9BYT1 436 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CCDC59Q9P031 241 aaKnown RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 MAU2Q9Y6X3 613 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 NBASA2RRP1 2371 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 TPRP12270 2363 aaKnown RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CARNS1A5YM72 827 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 FABP12A6NFH5 140 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CENPXA8MT69 81 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 OSMP13725 252 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CELP19835 753 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 RACK1P63244 317 aaKnown RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 BAK1Q16611 211 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 PRSS41Q7RTY9 318 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 ADGRF3Q8IZF5 1079 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 VOPP1Q96AW1 172 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 TXNDC15Q96J42 360 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 SPACA7Q96KW9 195 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 TEFMQ96QE5 360 aaKnown RBP12.6□□□□□ -0.39
COL6A2-204ENST00000409416 HHATLQ9HCP6 504 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 HCN3Q9P1Z3 774 aa12.6□□□□□ -0.39
COL6A2-204ENST00000409416 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ZAR1LA6NP61 321 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 CASKO14936 926 aa12.59□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF888P0CJ79 500 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-204ENST00000409416 CD8BP10966 210 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms