RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LGI1O95970 557 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 LALBAP00709 142 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 PIGRP01833 764 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 HLA-DQB1P01920 261 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 LCKP06239 509 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 S100A9P06702 114 aaKnown RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 FGF4P08620 206 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 C1SP09871 688 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 ANXA3P12429 323 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 CKMT1AP12532 417 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 ZNF250P15622 560 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 NCK1P16333 377 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 HOXB8P17481 243 aaPredicted RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 CYP2F1P24903 491 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 NTSR1P30989 418 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 LIPAP38571 399 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 DCTP40126 519 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 INPP1P49441 399 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 MEOX2P50222 304 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 ATP12AP54707 1039 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 NXPH1P58417 271 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 SNRPD2P62316 118 aaKnown RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 PSPHP78330 225 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 SP2Q02086 613 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 SCAPQ12770 1279 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 DPYSL2Q16555 572 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 WSCD2Q2TBF2 565 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 KIAA1614Q5VZ46 1190 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 BSPRYQ5W0U4 402 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 LAMTOR1Q6IAA8 161 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 APOBEC3HQ6NTF7 200 aaKnown RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 METAP1DQ6UB28 335 aaPredicted RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 FAM131AQ6UXB0 335 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 HSDL2Q6YN16 418 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 GPR149Q86SP6 731 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 PSTKQ8IV42 348 aaKnown RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 CNTN4Q8IWV2 1026 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 CENPLQ8N0S6 344 aaPredicted RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 LNX2Q8N448 690 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 SLC37A3Q8NCC5 494 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 SMRP1Q8NCR6 262 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 GMCL1P1Q8NEA9 526 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 OR4D10Q8NGI6 311 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 OR9Q1Q8NGQ5 310 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 OR9I1Q8NGQ6 314 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 ZNF675Q8TD23 568 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 ATXN7L3BQ96GX2 97 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 ERMAPQ96PL5 475 aaPredicted RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 AGAP2Q99490 1192 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 GAL3ST1Q99999 423 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 P2RY13Q9BPV8 354 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 CINPQ9BW66 212 aaPredicted RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 VN1R3Q9BXE9 311 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 MMP28Q9H239 520 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 SAV1Q9H4B6 383 aaPredicted RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 RIBC2Q9H4K1 309 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 GLOD4Q9HC38 313 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 BIN3Q9NQY0 253 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 RGS18Q9NS28 235 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 CISHQ9NSE2 258 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 AIG1Q9NVV5 245 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 MPP6Q9NZW5 540 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 WRAP73Q9P2S5 460 aaPredicted RBP5.15□□□□□ -1.59
CLK1-202ENST00000409403 GINS2Q9Y248 185 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 KCNK7Q9Y2U2 307 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 FIS1Q9Y3D6 152 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 STYXL1Q9Y6J8 313 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 V9GYH0 126 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 COL1A2P08123 1366 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 CENPVL1A0A0U1RR11 272 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ZCWPW2A0A1B0GU75 182 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 A8MT66 165 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 A8MUA0 341 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 J3QKU1 62 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 M0R3H8 397 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 AZIN1O14977 448 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 KIAA0513O60268 411 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 SLC22A3O75751 556 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 DHFRP00374 187 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 SERPINA1P01009 418 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 MT-ND1P03886 318 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 S100A8P05109 93 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ASGR1P07306 291 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ALDOCP09972 364 aaKnown RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 SMIM6P0DI80 62 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 CD19P15391 556 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ARSBP15848 533 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 STOMP27105 288 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 NRIP1P48552 1158 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 RGS6P49758 472 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 GDI2P50395 445 aaKnown RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 CLCN3P51790 818 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 AKR1D1P51857 326 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 POLR2JP52435 117 aaKnown RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 LIMK1P53667 647 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ARPP19P56211 112 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TIRAPP58753 221 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 CRADDP78560 199 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 MXD4Q14582 209 aaPredicted RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 SF3A2Q15428 464 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms