RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TIMP3P35625 211 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 KIR3DL1P43629 444 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 TRPC1P48995 793 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ASCL1P50553 236 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 TLE4Q04727 773 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 LTB4RQ15722 352 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 DECR1Q16698 335 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 VPS26BQ4G0F5 336 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 CYP27C1Q4G0S4 372 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ACSF3Q4G176 576 aaPredicted RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 VASNQ6EMK4 673 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM71E1Q6IPT2 247 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 NOXRED1Q6NXP6 359 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 SH2D5Q6ZV89 423 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 R3HCC1LQ7Z5L2 792 aaKnown RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 IFNEQ86WN2 208 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 PLCZ1Q86YW0 608 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 LURAP1LQ8IV03 231 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 CCDC71Q8IV32 467 aaPredicted RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 KIRREL3Q8IZU9 778 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 MMP21Q8N119 569 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 C4orf33Q8N1A6 199 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 OR14L1PQ8NHC6 308 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ABTB1Q969K4 478 aaPredicted RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 TMBIM1Q969X1 311 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 MTERF3Q96E29 417 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ZBED6CLQ96FA7 236 aaPredicted RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 VSTM2LQ96N03 204 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ZFP3Q96NJ6 502 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 GNRHR2Q96P88 292 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF559Q9BR84 538 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 OR2B2Q9GZK3 357 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 FOLH1BQ9HBA9 442 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 LRTM1Q9HBL6 345 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 Q9N2J8 555 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 SDHAF3Q9NRP4 125 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF629Q9UEG4 869 aaPredicted RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 LGALS13Q9UHV8 139 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 DKKL1Q9UK85 242 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 EDARQ9UNE0 448 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ABCG2Q9UNQ0 655 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 C19orf53Q9UNZ5 99 aaPredicted RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 CAMK2AQ9UQM7 478 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 POLR3HQ9Y535 204 aaPredicted RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 HRH3Q9Y5N1 445 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 WIF1Q9Y5W5 379 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 APCP25054 2843 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 EML6Q6ZMW3 1958 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 A0A0G2JNJ9 132 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 NKX2-6A6NCS4 301 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CD8B2A6NJW9 211 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 H0Y3Z8 333 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 LINC01387J3KSC0 135 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 UBFD1O14562 309 aaKnown RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 PDPK1O15530 556 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 TBX19O60806 448 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 ICOSLGO75144 302 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 KCNH1O95259 989 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 JUNP05412 331 aaKnown RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 TUBBP07437 444 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CT45A8P0DMV1 189 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CT45A9P0DMV2 189 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CYP4B1P13584 511 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 IGFBP2P18065 325 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CHMP24386 653 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 SRD5A2P31213 254 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 GPC1P35052 558 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 FOXA1P55317 472 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 DUSP2Q05923 314 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 TFF3Q07654 80 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 MYBPHQ13203 477 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 GANABQ14697 944 aaKnown RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CDSNQ15517 529 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CT45A2Q5DJT8 189 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 FNDC7Q5VTL7 733 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 BICRALQ6AI39 1079 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 RTL6Q6ICC9 239 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 LRIG3Q6UXM1 1119 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 WDR53Q7Z5U6 358 aaPredicted RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CROCCP2Q86T23 111 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 C10orf107Q8IVU9 208 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 SLC44A2Q8IWA5 706 aaPredicted RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 DMRTC2Q8IXT2 367 aaPredicted RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 OR2L13Q8N349 312 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 RPRMLQ8N4K4 120 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 NATD1Q8N6N6 113 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM83FQ8NEG4 500 aaPredicted RBP8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 OR4K17Q8NGC6 315 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CEP70Q8NHQ1 597 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 ZPLD1Q8TCW7 415 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 KAT2AQ92830 837 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 PPCDCQ96CD2 204 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 PPP3R2Q96LZ3 170 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 NODALQ96S42 347 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 ADOQ96SZ5 270 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 TIMP4Q99727 224 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 TM9SF2Q99805 663 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 PTGES2Q9H7Z7 377 aa8.29□□□□□ -1.08
SNORD88A-201ENST00000408314 CALHM2Q9HA72 323 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms