RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FOLH1BQ9HBA9 442 aa17.59■□□□□ 0.41
SMARCB1-204ENST00000407422 MCCC2Q9HCC0 563 aa17.59■□□□□ 0.41
SMARCB1-204ENST00000407422 SERHLQ9NQF3 203 aa17.59■□□□□ 0.41
SMARCB1-204ENST00000407422 SENP1Q9P0U3 644 aa17.59■□□□□ 0.41
SMARCB1-204ENST00000407422 DOCK7Q96N67 2140 aa17.59■□□□□ 0.41
SMARCB1-204ENST00000407422 TLDC2A0PJX2 215 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 OR6C70A6NIJ9 312 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 AHRRA9YTQ3 701 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 H3BQF6 201 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 RSL1D1O76021 490 aaKnown RBP17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 UROSP10746 265 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 PCLAFQ15004 111 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 NHSL2Q5HYW2 709 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 NOXRED1Q6NXP6 359 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 WDR53Q7Z5U6 358 aaPredicted RBP17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 TNIP2Q8NFZ5 429 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 OR4N2Q8NGD1 307 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 PRDM14Q9GZV8 571 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 MYNNQ9NPC7 610 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 MIEF1Q9NQG6 463 aa17.58■□□□□ 0.41
SMARCB1-204ENST00000407422 TSPAN2O60636 221 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 EPPINO95925 133 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 MC3RP41968 323 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 NCBP2P52298 156 aaKnown RBP eCLIP17.58■□□□□ 0.43e-7■■□□□ 13.9
SMARCB1-204ENST00000407422 DLX5P56178 289 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 KIAA0040Q15053 153 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 SLC35A4Q96G79 324 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 EGLN2Q96KS0 407 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 GATA5Q9BWX5 397 aaPredicted RBP17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 RRAGDQ9NQL2 400 aaPredicted RBP17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 CAMK2AQ9UQM7 478 aa17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 ANKHD1Q8IWZ3 2542 aaKnown RBP17.58■□□□□ 0.4
SMARCB1-204ENST00000407422 FAM47E-STBD1D6RA91 191 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 TACR1P25103 407 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 TMEM107Q6UX40 140 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 SLC44A2Q8IWA5 706 aaPredicted RBP17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 FAM76AQ8TAV0 307 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 ABTB1Q969K4 478 aaPredicted RBP17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 EFHD2Q96C19 240 aaPredicted RBP17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 TMCO6Q96DC7 493 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 WDYHV1Q96HA8 205 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 GLIPR2Q9H4G4 154 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 TAS2R9Q9NYW1 312 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 TAS2R7Q9NYW3 318 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 FIS1Q9Y3D6 152 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 PCNX3Q9H6A9 2034 aa17.57■□□□□ 0.4
SMARCB1-204ENST00000407422 SEC22BO75396 215 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 VSNL1P62760 191 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 PSG6Q00889 435 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 SNTB1Q13884 538 aaKnown RBP17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 SLC25A35Q3KQZ1 300 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 OR5M10Q6IEU7 315 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 LARP4Q71RC2 724 aaKnown RBP eCLIP17.56■□□□□ 0.45e-8■□□□□ 9
SMARCB1-204ENST00000407422 PM20D2Q8IYS1 436 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 CLYBLQ8N0X4 340 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 RELL2Q8NC24 303 aaPredicted RBP17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 OR2T11Q8NH01 316 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 STMN4Q9H169 189 aaPredicted RBP17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 FBXL2Q9UKC9 423 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 F8P00451 2351 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 AKAP6Q13023 2319 aa17.56■□□□□ 0.4
SMARCB1-204ENST00000407422 HRNRQ86YZ3 2850 aaPredicted RBP17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 HSPB2A8KAH6 182 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 C17orf51A8MQB3 221 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 B4DXG7 233 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 ABCB7O75027 752 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 CBR3O75828 277 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 IL12BP29460 328 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 CEACAM8P31997 349 aaPredicted RBP17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 ZNF155Q12901 538 aaPredicted RBP17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 HSPB2Q16082 182 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 Q6ZSR9 355 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 LACC1Q8IV20 430 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 BANPQ8N9N5 519 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 GFM2Q969S9 779 aaKnown RBP17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 APOPT1Q96IL0 206 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 AMDHD1Q96NU7 426 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 TUBB1Q9H4B7 451 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 OR10H1Q9Y4A9 318 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 WIF1Q9Y5W5 379 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 MPDZO75970 2070 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 HIVEP1P15822 2718 aa17.55■□□□□ 0.4
SMARCB1-204ENST00000407422 A0A087WV62 115 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 UPK1AO00322 258 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 AZIN1O14977 448 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 TRIM13O60858 407 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 BMP5P22003 454 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 PRPH2P23942 346 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 TIMP3P35625 211 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 KRT20P35900 424 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 EFR3AQ14156 821 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 SH2D4BQ5SQS7 431 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 NSUN5P2Q63ZY6 315 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 ANKRD26P1Q6NSI1 321 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 POMZP3Q6PJE2 187 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 IKBIPQ70UQ0 350 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 TRABD2AQ86V40 505 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 PLCZ1Q86YW0 608 aa17.54■□□□□ 0.4
SMARCB1-204ENST00000407422 OR14L1PQ8NHC6 308 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms