RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TNFRSF17Q02223 184 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 ST3GAL3Q11203 375 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 TSPAN31Q12999 210 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 NFATC4Q14934 902 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 ATAT1Q5SQI0 421 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 SLC27A4Q6P1M0 643 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 SLC36A4Q6YBV0 504 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 ZNF730Q6ZMV8 503 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 PRICKLE2Q7Z3G6 844 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 CCDC190Q86UF4 302 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 MEX3DQ86XN8 651 aaKnown RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 LRRC25Q8N386 305 aaPredicted RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 ADAMTS15Q8TE58 950 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 DIO2Q92813 273 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 CEP19Q96LK0 163 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 C10orf90Q96M02 699 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 ANKRD19PQ9H560 264 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 SMURF1Q9HCE7 757 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 SEMA4GQ9NTN9 838 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 KLHL28Q9NXS3 571 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 ZNF624Q9P2J8 865 aaPredicted RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 PCDHGB6Q9Y5F9 930 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 A0A1W2PQF6 199 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 IRGMA1A4Y4 181 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 HYKKA2RU49 373 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 LOC110117498-PIK3R3F6TDL0 507 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 UBXN7O94888 489 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 KLF8O95600 359 aaPredicted RBP15.78■□□□□ 0.12
NUP50-203ENST00000407019 SLC35G6P0C7Q6 338 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 CCNYL3P0C7X3 344 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 CPN2P22792 545 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 FAM214AQ32MH5 1076 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 KLHL22Q53GT1 634 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 FAM111BQ6SJ93 734 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 TMEM184AQ6ZMB5 413 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 DGLUCYQ7Z3D6 616 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 RD3Q7Z3Z2 195 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 OR52P1PQ8NH57 321 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 PIK3R3Q92569 461 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 HTRA1Q92743 480 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 ZG16BQ96DA0 208 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 SLC35A4Q96G79 324 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 MS4A4EQ96PG1 132 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 SAP130Q9H0E3 1048 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 PHF11Q9UIL8 331 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 SCML1Q9UN30 329 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 SSR3Q9UNL2 185 aa15.78■□□□□ 0.12
NUP50-203ENST00000407019 MYO10Q9HD67 2058 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 GSAPA4D1B5 854 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 EPOPA6NHQ4 379 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 DUXAA6NLW8 204 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 SNTNA6NMZ2 147 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 ZNF670-ZNF695F2Z2N8 137 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 ZSCAN9O15535 394 aaPredicted RBP15.77■□□□□ 0.12
NUP50-203ENST00000407019 NARSO43776 548 aaKnown RBP15.77■□□□□ 0.12
NUP50-203ENST00000407019 PTTG1O95997 202 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 MYL12AP19105 171 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 AVPR1BP47901 424 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 PDX1P52945 283 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 CD300CQ08708 224 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 C3orf38Q5JPI3 329 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 C6orf132Q5T0Z8 1188 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 RASSF6Q6ZTQ3 369 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 USP30Q70CQ3 517 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 RRM2BQ7LG56 351 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 MRGPREQ86SM8 312 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 TRIM73Q86UV7 250 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 PHC2Q8IXK0 858 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 OR7G2Q8NG99 324 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 OR8D4Q8NGM9 314 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 PIGXQ8TBF5 258 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 WDR92Q96MX6 357 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 SLC38A2Q96QD8 506 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 PRRG3Q9BZD7 231 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 C6orf106Q9H6K1 298 aaPredicted RBP15.77■□□□□ 0.12
NUP50-203ENST00000407019 SIAEQ9HAT2 523 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 MRPS18AQ9NVS2 196 aaKnown RBP15.77■□□□□ 0.12
NUP50-203ENST00000407019 NCKAP1Q9Y2A7 1128 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 CA5BQ9Y2D0 317 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 CHST2Q9Y4C5 530 aa15.77■□□□□ 0.12
NUP50-203ENST00000407019 CTDSP2O14595 271 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 AP3D1O14617 1153 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 PRODHO43272 600 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 AQP9O43315 295 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 SNX4O95219 450 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 ZIC2O95409 532 aaPredicted RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 DLGAP3O95886 979 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 AGR2O95994 175 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 ACP2P11117 423 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 TRHRP34981 398 aaPredicted RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 RPS19P39019 145 aaKnown RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 ETV5P41161 510 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 ACTR1BP42025 376 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 ETV1P50549 477 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 ACTR1AP61163 376 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 KIR2DS3Q14952 304 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 SUZ12Q15022 739 aaKnown RBP15.77■□□□□ 0.11
NUP50-203ENST00000407019 LIPKQ5VXJ0 399 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 HEPHL1Q6MZM0 1159 aa15.77■□□□□ 0.11
NUP50-203ENST00000407019 MFSD12Q6NUT3 480 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms