RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 NPIPA1Q9UND3 350 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 PRELID1Q9Y255 219 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 WDR37Q9Y2I8 494 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 SCN10AQ9Y5Y9 1956 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ANXA2P2A6NMY6 339 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 TMX2-CTNND1H3BSU7 103 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 HCRTR2O43614 444 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 RDH16O75452 317 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ANXA2P07355 339 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 S100A1P23297 94 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 TGFBR2P37173 567 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 PSPHP78330 225 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 B4GALNT1Q00973 533 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 CCINQ13939 588 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 LRIT3Q3SXY7 679 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 C9orf50Q5SZB4 431 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 FRMPD2BQ6IN97 320 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 SLC48A1Q6P1K1 146 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 FIGNL1Q6PIW4 674 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 WASH2PQ6VEQ5 465 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 RNF175Q8N4F7 328 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 TMEM151AQ8N4L1 468 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 HORMAD2Q8N7B1 307 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 FAM86B1Q8N7N1 296 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 C19orf47Q8N9M1 422 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF740Q8NDX6 193 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 LGALS12Q96DT0 336 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 LRR1Q96L50 414 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ERMAPQ96PL5 475 aaPredicted RBP4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 POLDIP3Q9BY77 421 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ANKRD19PQ9H560 264 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 FGF22Q9HCT0 170 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ING3Q9NXR8 418 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ING4Q9UNL4 249 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 NAALAD2Q9Y3Q0 740 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 GOLGA4Q13439 2230 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF236Q9UL36 1845 aa4.47□□□□□ -1.69
PCDH11X-207ENST00000406881 TMEM202A6NGA9 273 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 AGAP14A8MT82 685 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 TAF4O00268 1085 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 PHYHO14832 338 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 SLC16A6O15403 523 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 AQP9O43315 295 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 TSPAN9O75954 239 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 STSP08842 583 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 HOXC4P09017 264 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 UBL4AP11441 157 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 SRFP11831 508 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 PEPDP12955 493 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 EDNRAP25101 427 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 CDKN2CP42773 168 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 ACTA2P62736 377 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 ACTG2P63267 376 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 MXD1Q05195 221 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 EFR3AQ14156 821 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 E2F2Q14209 437 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 NR0B2Q15466 257 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 RPS26P11Q5JNZ5 115 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 DCST2Q5T1A1 773 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 AGBL4Q5VU57 503 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 PTCRAQ6ISU1 281 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 LIN54Q6MZP7 749 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 PIWIL3Q7Z3Z3 882 aaKnown RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 AKAP14Q86UN6 197 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 SLITRK4Q8IW52 837 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 ETFBKMTQ8IXQ9 262 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 RNF113BQ8IZP6 322 aaKnown RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 HS3ST5Q8IZT8 346 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 MR1Q95460 341 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 TBC1D20Q96BZ9 403 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 TEX37Q96LM6 180 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 HSPA12BQ96MM6 686 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 AMDHD1Q96NU7 426 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 CMKLR1Q99788 373 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 KCNS3Q9BQ31 491 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 CLEC4MQ9H2X3 399 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 CXorf36Q9H7Y0 433 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 DDX31Q9H8H2 851 aaKnown RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 GPN1Q9HCN4 374 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 TESQ9UGI8 421 aaKnown RBP4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 HCN2Q9UL51 889 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 SLC17A4Q9Y2C5 497 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 MMACHCQ9Y4U1 282 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 CDH10Q9Y6N8 788 aa4.46□□□□□ -1.69
PCDH11X-207ENST00000406881 A0A0A6YYC8 382 aaPredicted RBP4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 ISPDA4D126 451 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 C7orf72A4D263 438 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 I3L1I5 382 aaPredicted RBP4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 J3QLW9 94 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 K7ESM1 405 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 M0R3H8 397 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 FXYD1O00168 92 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 PLPP1O14494 284 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 BCAT2O15382 392 aaPredicted RBP4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 ORC5O43913 435 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF432O94892 652 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 CDRT1O95170 752 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 NDUFB2O95178 105 aa4.46□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF19P17023 458 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms