RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CAMK2BQ13554 666 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 NFE2L1Q14494 772 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 PLET1Q6UQ28 207 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 C17orf64Q86WR6 236 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 KIF18BQ86Y91 864 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 TRIM48Q8IWZ4 208 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 DUSP18Q8NEJ0 188 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 GATAD2BQ8WXI9 593 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 TM9SF2Q99805 663 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 AIF1LQ9BQI0 150 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 ARHGAP9Q9BRR9 750 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 ACAT2Q9BWD1 397 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 PHF7Q9BWX1 381 aaPredicted RBP18.65■□□□□ 0.58
CCDC47-202ENST00000403162 LHX9Q9NQ69 397 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 PRUNE2Q8WUY3 3088 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 TRDV1A0A1B0GX56 115 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 SPINT1O43278 529 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 NR2F1P10589 423 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 MTNR1AP48039 350 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 GNG2P59768 71 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 ITPRIPL2Q3MIP1 535 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 TRIQKQ629K1 86 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 ZNF765Q7L2R6 523 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 ZNF485Q8NCK3 441 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 BBS10Q8TAM1 723 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 ZFAND1Q8TCF1 268 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 SPATA5L1Q9BVQ7 753 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 BEX2Q9BXY8 128 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 OR52A5Q9H2C5 316 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 WDR70Q9NW82 654 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 RBFOX1Q9NWB1 397 aaKnown RBP18.64■□□□□ 0.57
CCDC47-202ENST00000403162 PLAGL1Q9UM63 463 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 ASF1AQ9Y294 204 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 PCDHGB7Q9Y5F8 929 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 EPPINO95925 133 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 SLC2A2P11168 524 aaPredicted RBP18.64■□□□□ 0.57
CCDC47-202ENST00000403162 ERGP11308 486 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 ALAS2P22557 587 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 APEX1P27695 318 aaKnown RBP18.64■□□□□ 0.57
CCDC47-202ENST00000403162 GJA4P35212 333 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.57
CCDC47-202ENST00000403162 TATDN3Q17R31 274 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 MZT2BQ6NZ67 158 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 NUDT13Q86X67 352 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 Q8N402 240 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 C2orf73Q8N5S3 287 aaPredicted RBP18.64■□□□□ 0.57
CCDC47-202ENST00000403162 C19orf18Q8NEA5 215 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 OR5D16Q8NGK9 328 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 OR6T1Q8NGN1 323 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 XAGE5Q8WWM1 108 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 JPH3Q8WXH2 748 aaPredicted RBP18.64■□□□□ 0.57
CCDC47-202ENST00000403162 COQ7Q99807 217 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 PLA2G12AQ9BZM1 189 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 BCL2L10Q9HD36 194 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 WASH6PQ9NQA3 447 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 RPRD1BQ9NQG5 326 aaKnown RBP18.64■□□□□ 0.57
CCDC47-202ENST00000403162 TOR4AQ9NXH8 423 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 TAS2R7Q9NYW3 318 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 GPR34Q9UPC5 381 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 SLC27A6Q9Y2P4 619 aa18.64■□□□□ 0.57
CCDC47-202ENST00000403162 UNC80Q8N2C7 3258 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 SMIM30A4D0T7 59 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 KDM4EB2RXH2 506 aaPredicted RBP18.63■□□□□ 0.57
CCDC47-202ENST00000403162 TNFRSF10AO00220 468 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 TMPRSS11DO60235 418 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 LIMS3P0CW19 117 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 LIMS4P0CW20 117 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 GPR1P46091 355 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 MAN2A2P49641 1150 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 LSM11P83369 360 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC47-202ENST00000403162 MESP2Q0VG99 397 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 RIN1Q13671 783 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 EFR3AQ14156 821 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 RAET1GQ6H3X3 334 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 SLC27A4Q6P1M0 643 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 CNIH2Q6PI25 160 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 FAM83HQ6ZRV2 1179 aaPredicted RBP18.63■□□□□ 0.57
CCDC47-202ENST00000403162 OR5AR1Q8NGP9 310 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 TEX47Q8TBZ9 253 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 NUS1Q96E22 293 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 TRAF4Q9BUZ4 470 aaPredicted RBP18.63■□□□□ 0.57
CCDC47-202ENST00000403162 COMMD3Q9UBI1 195 aa18.63■□□□□ 0.57
CCDC47-202ENST00000403162 OR6C70A6NIJ9 312 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 NOTOA8MTQ0 251 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 LRRTM2O43300 516 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 APOL3O95236 402 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 FAM157BP0CG42 384 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 FAPQ12884 760 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 DCUN1D3Q8IWE4 304 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 UBE2J2Q8N2K1 259 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 YIPF7Q8N8F6 280 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 NLGN4YQ8NFZ3 816 aaPredicted RBP18.62■□□□□ 0.57
CCDC47-202ENST00000403162 WFIKKN2Q8TEU8 576 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 SLC9A6Q92581 669 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 SAP130Q9H0E3 1048 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 NIPAL2Q9H841 368 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 TEX10Q9NXF1 929 aaPredicted RBP18.62■□□□□ 0.57
CCDC47-202ENST00000403162 TAC3Q9UHF0 121 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 ADAM29Q9UKF5 820 aa18.62■□□□□ 0.57
CCDC47-202ENST00000403162 KPNA3O00505 521 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms