RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 RLN3Q8WXF3 142 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 SAMD8Q96LT4 415 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 RIPOR3Q96MK2 946 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 SECISBP2Q96T21 854 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 HDHD2Q9H0R4 259 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 MMP27Q9H306 513 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 CCDC86Q9H6F5 360 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 HHATLQ9HCP6 504 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 KCMF1Q9P0J7 381 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 PTGFRNQ9P2B2 879 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 KLHL42Q9P2K6 505 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 A0A087WUU8 490 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 A0A1W2PQ09 198 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 LRRN3E7EW58 273 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 FOXE1O00358 373 aaPredicted RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 KMOO15229 486 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 PSKH1P11801 424 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 CPMP14384 443 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 TGM1P22735 817 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 TRHRP34981 398 aaPredicted RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 RPL3P39023 403 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 SELENBP1Q13228 472 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 ZNF514Q96K75 400 aaPredicted RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 ZNF354BQ96LW1 612 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 NELL2Q99435 816 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 SLC17A9Q9BYT1 436 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 SAP130Q9H0E3 1048 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 LRRN3Q9H3W5 708 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 SMURF1Q9HCE7 757 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 SEMA4GQ9NTN9 838 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 NDRG2Q9UN36 371 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 CLUP10909 449 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 HIST1H1TP22492 207 aaPredicted RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 APEX1P27695 318 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 CXCR4P61073 352 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 SNRPD2P62316 118 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 RACK1P63244 317 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 PRDX1Q06830 199 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 IRF3Q14653 427 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 PRRT3Q5FWE3 981 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 RPTNQ6XPR3 784 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 C10orf53Q8N6V4 93 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 DCLRE1CQ96SD1 692 aaKnown RBP13.92□□□□□ -0.18
PFKL-202ENST00000397961 GABARAPL3Q9BY60 117 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 GABARAPL1Q9H0R8 117 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 TBCCD1Q9NVR7 557 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 RP1P56715 2156 aa13.92□□□□□ -0.18
PFKL-202ENST00000397961 OR6C74A6NCV1 312 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 PEX12O00623 359 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 DNAJB5O75953 348 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 SEMG1P04279 462 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 SRPRAP08240 638 aaKnown RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 ACADMP11310 421 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 CSNK2A2P19784 350 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 ACSL1P33121 698 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 METRNLQ641Q3 311 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 RNF44Q7L0R7 432 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 DENND6BQ8NEG7 585 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 ATP6V1C2Q8NEY4 427 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 MAGEB10Q96LZ2 347 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 WACQ9BTA9 647 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 GPR174Q9BXC1 333 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 ZNF717Q9BY31 904 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 BARHL1Q9BZE3 327 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 NEUROD4Q9HD90 331 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 APOBEC3BQ9UH17 382 aaKnown RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 NUFIP1Q9UHK0 495 aaKnown RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 SLC7A7Q9UM01 511 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 ZFR2Q9UPR6 939 aaKnown RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 WBP11Q9Y2W2 641 aaKnown RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 GPC6Q9Y625 555 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 TP53BP1Q12888 1972 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 TRAV27A0A087WT01 109 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 LOC105369274A0A096LPK9 316 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 LOC102723532A0A0G2JNH3 316 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 A8MUA0 341 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 CACNB4O00305 520 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 RNGTTO60942 597 aaKnown RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 ALPPP05187 535 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 EPHA5P54756 1037 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 SRP54P61011 504 aaKnown RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 RBBP4Q09028 425 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 SNAP47Q5SQN1 464 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 IDNKQ5T6J7 187 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 MSANTD1Q6ZTZ1 278 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 MARCH9Q86YJ5 346 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 CPOQ8IVL8 374 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 OR4N4Q8N0Y3 316 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 NEURL3Q96EH8 262 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 TRIM45Q9H8W5 580 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 FREM2Q5SZK8 3169 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 TAF4O00268 1085 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 APODP05090 189 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 AGERQ15109 404 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 NDUFAF6Q330K2 333 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 TMEM53Q6P2H8 277 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 UNC5DQ6UXZ4 953 aa13.91□□□□□ -0.18
PFKL-202ENST00000397961 TP53I13Q8NBR0 393 aaPredicted RBP13.91□□□□□ -0.18
PFKL-202ENST00000397961 OR52P1PQ8NH57 321 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms