RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 C22orf42Q6IC83 251 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 TCTN3Q6NUS6 607 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 TMIGD1Q6UXZ0 262 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 NANOGP1Q8N7R0 232 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 OR11H4Q8NGC9 324 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 APOBEC4Q8WW27 367 aaKnown RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 SORCS1Q8WY21 1168 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 SLC9A6Q92581 669 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 GLYATL1Q969I3 302 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 MED18Q9BUE0 208 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ZNF416Q9BWM5 594 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 POLR2J3Q9H1A7 115 aaKnown RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 LDAHQ9H6V9 325 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 KIF25Q9UIL4 384 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ADAM30Q9UKF2 790 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 MAFFQ9ULX9 164 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 YARS2Q9Y2Z4 477 aaKnown RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 RPL36Q9Y3U8 105 aaKnown RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 DNMT3AQ9Y6K1 912 aaPredicted RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 RNF215Q9Y6U7 377 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 A0A1W2PPL8 197 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 HEPACAM2A8MVW5 462 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ISM1B1AKI9 464 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 MPC2O95563 127 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 STOMP27105 288 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 RPL3P39023 403 aaKnown RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 DGKGP49619 791 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 HIST2H2AA3Q6FI13 130 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 CNIH2Q6PI25 160 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 USP30Q70CQ3 517 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 DGLUCYQ7Z3D6 616 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 CFAP206Q8IYR0 622 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ZNF655Q8N720 491 aaPredicted RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 OR4D11Q8NGI4 311 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 CEP76Q8TAP6 659 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 TIFAQ96CG3 184 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 EFCAB11Q9BUY7 163 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ABCG4Q9H172 646 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 B3GAT2Q9NPZ5 323 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 PCDHB16Q9NRJ7 776 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 C5AR2Q9P296 337 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 CCL26Q9Y258 94 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 KCNMB2Q9Y691 235 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 TLX2O43763 284 aaPredicted RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 PTP4A3O75365 173 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 H1F0P07305 194 aaKnown RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 UQCRC2P22695 453 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 GSTM5P46439 218 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 PNLIPRP1P54315 467 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 DCDC1P59894 354 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 MLLT11Q13015 90 aaPredicted RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 C1DQ13901 141 aaKnown RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 HEPACAMQ14CZ8 416 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 SNAPC1Q16533 368 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 TUSC1Q2TAM9 212 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 C12orf73Q69YU5 71 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 CYB5D2Q8WUJ1 264 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 CRISPLD2Q9H0B8 497 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 SLAMF7Q9NQ25 335 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 SEMA3GQ9NS98 782 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 TAS2R7Q9NYW3 318 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 CPNE7Q9UBL6 633 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 MGAT4BQ9UQ53 548 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 FAM170BA6NMN3 283 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 RTCAO00442 366 aaKnown RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 PRKYO43930 277 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 LZTS3O60299 673 aaPredicted RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 TIMP2P16035 220 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 XPAP23025 273 aaPredicted RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 ZNF81P51508 661 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 LGALSLQ3ZCW2 172 aaPredicted RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 TMEM201Q5SNT2 666 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 ATAT1Q5SQI0 421 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 PGBD2Q6P3X8 592 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 PROKR2Q8NFJ6 384 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 SLC5A11Q8WWX8 675 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 NELL2Q99435 816 aa15.06■□□□□ 0
CHMP1A-201ENST00000397901 PELOQ9BRX2 385 aaKnown RBP15.06■□□□□ 0
CHMP1A-201ENST00000397901 SLC7A9P82251 487 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 SCRN3Q0VDG4 424 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 HSPB3Q12988 150 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 IL18Q14116 193 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 ZNF730Q6ZMV8 503 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 HMGN2P46Q86SG4 172 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 OR11H7Q8NGC8 314 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 OR6C4Q8NGE1 309 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 OR8J1Q8NGP2 316 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 WBP1Q96G27 269 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 RADILQ96JH8 1075 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 MVB12BQ9H7P6 319 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 BAIAP2Q9UQB8 552 aa15.05■□□□□ 0
CHMP1A-201ENST00000397901 SPIN1Q9Y657 262 aaPredicted RBP15.05■□□□□ 0
CHMP1A-201ENST00000397901 KRBOX1C9JBD0 128 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 FAAHO00519 579 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 DHFRP00374 187 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 ITGB8P26012 769 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 ETV5P41161 510 aa15.05■□□□□ -0
CHMP1A-201ENST00000397901 AGFG1P52594 562 aaKnown RBP15.05■□□□□ -0
CHMP1A-201ENST00000397901 WDR5P61964 334 aaKnown RBP15.05■□□□□ -0
CHMP1A-201ENST00000397901 PUDPQ08623 228 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms