RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CYGBQ8WWM9 190 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SPACA7Q96KW9 195 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ORAI3Q9BRQ5 295 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CPNE5Q9HCH3 593 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CCDC59Q9P031 241 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF624Q9P2J8 865 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PCDHGA5Q9Y5G8 931 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CORINQ9Y5Q5 1042 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PRAMEF2O60811 474 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 GCM2O75603 506 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 C4BPBP20851 252 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CPN2P22792 545 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CTSKP43235 329 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 GCGRP47871 477 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 RGS8P57771 180 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 EFNB1P98172 346 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 MPEG1Q2M385 716 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CNPY1Q3B7I2 92 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SLC44A4Q53GD3 710 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 FAM205BPQ63HN1 556 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SCIMPQ6UWF3 145 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 QSOX2Q6ZRP7 698 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 HDDC2Q7Z4H3 204 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 POGLUT1Q8NBL1 392 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 AP3S1Q92572 193 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ALPK1Q96QP1 1244 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CTRCQ99895 268 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 COPS4Q9BT78 406 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 UCK2Q9BZX2 261 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SLC38A1Q9H2H9 487 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PPICP45877 212 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PGGT1BP53609 377 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 DGUOKQ16854 277 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PGS1Q32NB8 556 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 GPAT3Q53EU6 434 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 GPR139Q6DWJ6 353 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CASP12Q6UXS9 341 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 GALNT4Q8N4A0 578 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 FLCNQ8NFG4 579 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SLC37A2Q8TED4 501 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 DAZLQ92904 295 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 POM121Q96HA1 1249 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CCDC3Q9BQI4 270 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SLC26A1Q9H2B4 701 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 TBC1D29Q9UFV1 150 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ISM1B1AKI9 464 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 K7ESM1 405 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 HMGN4O00479 90 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SEC14L5O43304 696 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CHP2O43745 196 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 KIAA0513O60268 411 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PCYT1AP49585 367 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 BNC1Q01954 994 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 OTUD3Q5T2D3 398 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CWF19L1Q69YN2 538 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 RPS27LQ71UM5 84 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CACTIN-AS1Q8N1I8 211 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CSNK1A1LQ8N752 337 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 POMGNT2Q8NAT1 580 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 WDFY2Q96P53 400 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PDP1Q9P0J1 537 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 FTSJ1Q9UET6 329 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ABCG2Q9UNQ0 655 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 EXOSC1Q9Y3B2 195 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ROS1P08922 2347 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 A0A1W2PR48 441 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF99A8MXY4 864 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 OR2T1O43869 369 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 BCAS1O75363 584 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 AIFM1O95831 613 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 C6orf47O95873 294 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 TGFB1P01137 390 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 IL1AP01583 271 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 THEGLP0DJG4 465 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 NFATC3Q12968 1075 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 RIN1Q13671 783 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 HACD4Q5VWC8 232 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CD200R1LQ6Q8B3 271 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 C16orf62Q7Z3J2 963 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ARMC10Q8N2F6 343 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 VWA5B2Q8N398 1253 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF740Q8NDX6 193 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 NUBPLQ8TB37 319 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CHCHD3Q9NX63 227 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 DIMT1Q9UNQ2 313 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CEPT1Q9Y6K0 416 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 CACNA1DQ01668 2161 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 FAM86C2PA6NEL3 165 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PROS1P07225 676 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ALPPL2P10696 532 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 MLLT11Q13015 90 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 RNF130Q86XS8 419 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PLA2G15Q8NCC3 412 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 ISOC1Q96CN7 298 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 PPP1R36Q96LQ0 422 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 F2RL3Q96RI0 385 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 APOBEC3BQ9UH17 382 aaKnown RBP5.5□□□□□ -1.53
PTPRD-206ENST00000397617 SLC22A31A6NKX4 558 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 HS6ST1O60243 411 aa5.5□□□□□ -1.53
PTPRD-206ENST00000397617 LGALS3BPQ08380 585 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms