RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PLATP00750 562 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 GKN3PP0CG01 181 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 LAMP2P13473 410 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 GCGRP47871 477 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 CLDN12P56749 244 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 SLC7A9P82251 487 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 DEFA5Q01523 94 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 ADAM15Q13444 863 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 CDKN3Q16667 212 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 PRSS45Q7RTY3 260 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 KLHL36Q8N4N3 616 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 SNX33Q8WV41 574 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 UCN3Q969E3 161 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 GLYATL1Q969I3 302 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 TRIM43Q96BQ3 446 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-202ENST00000394820 SH2B3Q9UQQ2 575 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 GRIP1Q9Y3R0 1128 aa12.48□□□□□ -0.41
NFKB1-202ENST00000394820 ANKRD61A6NGH8 418 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 LRRC72A6NJI9 287 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SLC31A1O15431 190 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 NDUFS4O43181 175 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 KLHL18O94889 574 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 MT-ND4P03905 459 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 MYOGP15173 224 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 FUT1P19526 365 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SLC6A11P48066 632 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 WNT4P56705 351 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SAXO2Q658L1 398 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 LRRTM4Q86VH4 590 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 TMC8Q8IU68 726 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SFTPA1Q8IWL2 248 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SAMD8Q96LT4 415 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 TREX2Q9BQ50 279 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 EFCAB11Q9BUY7 163 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 P2RX2Q9UBL9 471 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 ZNF69Q9UC07 566 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 MGAT4BQ9UQ53 548 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 TRBV5-4A0A0C4DH59 114 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 MEIS3P1A6NDR6 274 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 CENPBD1B2RD01 187 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 EIF3FO00303 357 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 AKAP8O43823 692 aaKnown RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 RAD1O60671 282 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 GPR37L1O60883 481 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SRPRAP08240 638 aaKnown RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 HBQ1P09105 142 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SHC1P29353 583 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 CD79BP40259 229 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 WNT3P56703 355 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 RPTNQ6XPR3 784 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 CALHM3Q86XJ0 350 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 NATD1Q8N6N6 113 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 NKD1Q969G9 470 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 ECHDC3Q96DC8 303 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 MCHR1Q99705 422 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 BARHL1Q9BZE3 327 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 RETREG1Q9H6L5 497 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 THSD1Q9NS62 852 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 TEX10Q9NXF1 929 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 RASD1Q9Y272 281 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 HS3ST2Q9Y278 367 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 GRXCR2A6NFK2 248 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 PROM1O43490 865 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 CTSLP07711 333 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 STOMP27105 288 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 ACSL1P33121 698 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 LIM2P55344 173 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 BTN1A1Q13410 526 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 PRPF38BQ5VTL8 546 aaKnown RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 IRAK1BP1Q5VVH5 260 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 FRRS1Q6ZNA5 592 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 FTMTQ8N4E7 242 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 OR6T1Q8NGN1 323 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 SMPDL3AQ92484 453 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 RFT1Q96AA3 541 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 ST6GAL2Q96JF0 529 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 OR4K3Q96R72 315 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 MYEF2Q9P2K5 600 aaKnown RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 IKZF2Q9UKS7 526 aa12.47□□□□□ -0.41
NFKB1-202ENST00000394820 AK6Q9Y3D8 172 aaKnown RBP12.47□□□□□ -0.41
NFKB1-202ENST00000394820 TEX13CA0A0J9YWL9 993 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 PI15O43692 258 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 HLA-DQA2P01906 255 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 CBSLP0DN79 551 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 CBSP35520 551 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 RPL3P39023 403 aaKnown RBP12.46□□□□□ -0.41
NFKB1-202ENST00000394820 TOR1AIP1Q5JTV8 583 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
NFKB1-202ENST00000394820 ADIPOR2Q86V24 386 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 VRK2Q86Y07 508 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 LACC1Q8IV20 430 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 CBARPQ8N350 705 aaPredicted RBP12.46□□□□□ -0.41
NFKB1-202ENST00000394820 SYNPOQ8N3V7 929 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 OR9A1PQ8NGU1 263 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 GPR174Q9BXC1 333 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.41
NFKB1-202ENST00000394820 ZBP1Q9H171 429 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 TM7SF3Q9NS93 570 aa12.46□□□□□ -0.41
NFKB1-202ENST00000394820 TBX21Q9UL17 535 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms