RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FLYWCH1Q4VC44 716 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 NXPE4Q6UWF7 544 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 OVCH2Q7RTZ1 564 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 ZFAND4Q86XD8 727 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 LIX1Q8N485 282 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 KRTCAP2Q8N6L1 136 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 OR5T2Q8NGG2 359 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 NECAB3Q96P71 396 aaPredicted RBP17.88■□□□□ 0.45
CCDC50-202ENST00000392456 TBCDQ9BTW9 1192 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 UGT2B28Q9BY64 529 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 CMTM6Q9NX76 183 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 ICKQ9UPZ9 632 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 MAGED1Q9Y5V3 778 aaPredicted RBP17.88■□□□□ 0.45
CCDC50-202ENST00000392456 OR2A25A4D2G3 310 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 A6NCN8 305 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 K7ESF4 209 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 FADS2O95864 444 aaKnown RBP17.88■□□□□ 0.45
CCDC50-202ENST00000392456 HBQ1P09105 142 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 UMPSP11172 480 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 BCKDHAP12694 445 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 EEF1A1P68104 462 aaKnown RBP17.88■□□□□ 0.45
CCDC50-202ENST00000392456 PLIN5Q00G26 463 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 EEF1A2Q05639 463 aaKnown RBP17.88■□□□□ 0.45
CCDC50-202ENST00000392456 ASAH1Q13510 395 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 C1orf61Q13536 156 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 BAK1Q16611 211 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 EEF1A1P5Q5VTE0 462 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 TSSK4Q6SA08 328 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 UBALD2Q8IYN6 164 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 NLGN4YQ8NFZ3 816 aaPredicted RBP17.88■□□□□ 0.45
CCDC50-202ENST00000392456 APOLD1Q96LR9 279 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 ACTR10Q9NZ32 417 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 SLAMF8Q9P0V8 285 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 FANCMQ8IYD8 2048 aa17.88■□□□□ 0.45
CCDC50-202ENST00000392456 SNRNP200O75643 2136 aaKnown RBP17.87■□□□□ 0.45
CCDC50-202ENST00000392456 HEATR5BQ9P2D3 2071 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 METTL12A8MUP2 240 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 HNRNPCL2B2RXH8 293 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 WWP2O00308 870 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 SLC30A4O14863 429 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 BCKDHBP21953 392 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 SLC19A1P41440 591 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 LRRC74AQ0VAA2 488 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 ARHGAP19Q14CB8 494 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 PAGE3Q5JUK9 113 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 HES5Q5TA89 166 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 ZNF691Q5VV52 312 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 ATG9BQ674R7 924 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 OR7E24Q6IFN5 339 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 WDR34Q96EX3 536 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 REG4Q9BYZ8 158 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 TRIM8Q9BZR9 551 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 GPR27Q9NS67 375 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 EXD2Q9NVH0 621 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 PCDHGA2Q9Y5H1 932 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 hCG_1807616A0A1W2PRN6 198 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 H7BY64 318 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 PRSS23O95084 383 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 JUNDP17535 347 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 SLC6A2P23975 617 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 RAB28P51157 221 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 RPL6Q02878 288 aaKnown RBP17.87■□□□□ 0.45
CCDC50-202ENST00000392456 KCNAB2Q13303 367 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 EXOSC2Q13868 293 aaKnown RBP17.87■□□□□ 0.45
CCDC50-202ENST00000392456 RCAN2Q14206 197 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 C21orf62-AS1Q17RA5 79 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 USP39Q53GS9 565 aaKnown RBP17.87■□□□□ 0.45
CCDC50-202ENST00000392456 LCTLQ6UWM7 567 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 FAM129CQ86XR2 697 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 NANPQ8TBE9 248 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 SETD7Q8WTS6 366 aaKnown RBP17.87■□□□□ 0.45
CCDC50-202ENST00000392456 TMBIM1Q969X1 311 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 PRAP1Q96NZ9 151 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 SORCS2Q96PQ0 1159 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 EBPLQ9BY08 206 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 SPHK1Q9NYA1 384 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 NDUFAF1Q9Y375 327 aa17.87■□□□□ 0.45
CCDC50-202ENST00000392456 SPAG17Q6Q759 2223 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 LRP4O75096 1905 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 IGKV1-8A0A0C4DH67 115 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 A0A1W2PQ09 198 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 DNASE2O00115 360 aaPredicted RBP17.86■□□□□ 0.45
CCDC50-202ENST00000392456 ANGPTL1O95841 491 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 AMD1P17707 334 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 MRPL19P49406 292 aaKnown RBP17.86■□□□□ 0.45
CCDC50-202ENST00000392456 POLR2JP52435 117 aaKnown RBP17.86■□□□□ 0.45
CCDC50-202ENST00000392456 BPIFB3P59826 476 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 RAB14P61106 215 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 RPS13P62277 151 aaKnown RBP17.86■□□□□ 0.45
CCDC50-202ENST00000392456 GPR19Q15760 415 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 COL28A1Q2UY09 1125 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 RUNDC3AQ59EK9 446 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 MED27Q6P2C8 311 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 KBTBD8Q8NFY9 601 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 OR6S1Q8NH40 331 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 CNIH3Q8TBE1 160 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 SMPDL3AQ92484 453 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 PLCL2Q9UPR0 1127 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 ALG5Q9Y673 324 aa17.86■□□□□ 0.45
CCDC50-202ENST00000392456 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms