RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SYT7O43581 403 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 PDE5AO76074 875 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 KLF8O95600 359 aaPredicted RBP0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 PRB1P04280 392 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 HOXA9P31269 272 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 HSPA4P34932 840 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 GPC3P51654 580 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 METAP1P53582 386 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 SPHARQ15513 63 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 OR1C1Q15619 314 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 LRRC36Q1X8D7 754 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 SHROOM1Q2M3G4 852 aaPredicted RBP0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 CRY2Q49AN0 593 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 HSP90AB4PQ58FF6 505 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 RILPL1Q5EBL4 403 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 BMP2KLQ5H9B9 411 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 LGSNQ5TDP6 509 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 FAM180BQ6P0A1 224 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 TMEM110Q86TL2 294 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 PRCCQ92733 491 aaPredicted RBP0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 FGGYQ96C11 551 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 RMDN2Q96LZ7 410 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 SSX3Q99909 188 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 LZTS2Q9BRK4 669 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 GORASP2Q9H8Y8 452 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 EXOSC3Q9NQT5 275 aaKnown RBP0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 TECRQ9NZ01 308 aaKnown RBP0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 ANKRD30BQ9BXX2 1392 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 DHRS7CA6NNS2 312 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 YJEFN3A6XGL0 299 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 DIAPH2O60879 1101 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 PGLSO95336 258 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 CTDNEP1O95476 244 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 STSP08842 583 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 NF2P35240 595 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 BTDP43251 543 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 PTENP60484 403 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 NOP14P78316 857 aaKnown RBP0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 WDR78Q5VTH9 848 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 FAM205BPQ63HN1 556 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 OR5M10Q6IEU7 315 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 STEAP1BQ6NZ63 245 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 ZNF880Q6PDB4 577 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 SASS6Q6UVJ0 657 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 GPR142Q7Z601 462 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 ANKRD46Q86W74 232 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 CSNK1A1LQ8N752 337 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 HEXDCQ8WVB3 486 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 PIGCQ92535 297 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 TIGD1Q96MW7 591 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 TXN2Q99757 166 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 KAT8Q9H7Z6 458 aaKnown RBP0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 ZNF430Q9H8G1 570 aaPredicted RBP0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 MRPL17Q9NRX2 175 aaKnown RBP0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 GDAP2Q9NXN4 497 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 TRPC4Q9UBN4 977 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 SMC3Q9UQE7 1217 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 TMEM5Q9Y2B1 443 aa0.14□□□□□ -2.39
RNU6-239P-201ENST00000390990 TUBGCP6Q96RT7 1819 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 IGHV7-81A0A0B4J1V7 117 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 C11orf98E9PRG8 122 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 CYB561D2O14569 222 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 LETM1O95202 739 aaPredicted RBP0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 PCCBP05166 539 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 HOXB7P09629 217 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 OR8U8P0C7N1 319 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 GHRP10912 638 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 NPY1RP25929 384 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 DLSTP36957 453 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 HEPACAMQ14CZ8 416 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 CAMK4Q16566 473 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 MEA1Q16626 185 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 ALFQ53S48 1182 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 METTL11BQ5VVY1 283 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 ZNF57Q68EA5 555 aaPredicted RBP0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 TXNRD3NBQ6F5E7 133 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 ACP7Q6ZNF0 438 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 C12orf56Q8IXR9 622 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 MTURNQ8N3F0 131 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 POGLUT1Q8NBL1 392 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 OCC1Q8TAD7 63 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 SETD6Q8TBK2 473 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 SPATA18Q8TC71 538 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 GIMAP1Q8WWP7 306 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 RIT1Q92963 219 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 OR2M2Q96R28 347 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 AGPAT1Q99943 283 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 TSPY26PQ9H489 355 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 LMAN1LQ9HAT1 526 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 EML4Q9HC35 981 aaKnown RBP0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 NRN1Q9NPD7 142 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 C6orf203Q9P0P8 240 aaPredicted RBP0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 CHORDC1Q9UHD1 332 aaPredicted RBP0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 ZNF391Q9UJN7 358 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 IFT52Q9Y366 437 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 IGSF9BQ9UPX0 1349 aa0.13□□□□□ -2.39
RNU6-239P-201ENST00000390990 MSH4O15457 936 aa0.12□□□□□ -2.39
RNU6-239P-201ENST00000390990 EPB41L2O43491 1005 aaKnown RBP0.12□□□□□ -2.39
RNU6-239P-201ENST00000390990 EFNA2O43921 213 aa0.12□□□□□ -2.39
RNU6-239P-201ENST00000390990 RANBP6O60518 1105 aaKnown RBP0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms