RNA–Protein interactions for RNA: ENST00000382948.9

MBD1-206, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MBD1, Length 2,434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-206ENST00000382948 TRAM2Q15035 370 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 COL13A1Q5TAT6 717 aaPredicted RBP17.11■□□□□ 0.33
MBD1-206ENST00000382948 ANKRD54Q6NXT1 300 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 NR4A3Q92570 626 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 HTRA1Q92743 480 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 SRMSQ9H3Y6 488 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 C6orf106Q9H6K1 298 aaPredicted RBP17.11■□□□□ 0.33
MBD1-206ENST00000382948 ZNF624Q9P2J8 865 aaPredicted RBP17.11■□□□□ 0.33
MBD1-206ENST00000382948 STUB1Q9UNE7 303 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 CA5BQ9Y2D0 317 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 A0A1W2PQF6 199 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 ETV6P41212 452 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 EFNB1P98172 346 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 ATAT1Q5SQI0 421 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 ZNF730Q6ZMV8 503 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 OR9Q1Q8NGQ5 310 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 GNPDA2Q8TDQ7 276 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 ADAMTS15Q8TE58 950 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 DIO2Q92813 273 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 FGF11Q92914 225 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 SEMA4GQ9NTN9 838 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 CRNNQ9UBG3 495 aaPredicted RBP17.11■□□□□ 0.33
MBD1-206ENST00000382948 TESQ9UGI8 421 aaKnown RBP17.11■□□□□ 0.33
MBD1-206ENST00000382948 PCDHGB6Q9Y5F9 930 aa17.11■□□□□ 0.33
MBD1-206ENST00000382948 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 H0Y8X5 98 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 WWP2O00308 870 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 SLC35G6P0C7Q6 338 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CRYBB2P43320 205 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 AVPR1BP47901 424 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 LIPKQ5VXJ0 399 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 SLC27A4Q6P1M0 643 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 FAM111BQ6SJ93 734 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CCDC190Q86UF4 302 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 RBM12BQ8IXT5 1001 aaKnown RBP17.1■□□□□ 0.33
MBD1-206ENST00000382948 COL26A1Q96A83 441 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 C10orf90Q96M02 699 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 FBRSQ9HAH7 460 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CNIH4Q9P003 139 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 KLHL3Q9UH77 587 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CHST2Q9Y4C5 530 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 TRBV23OR9-2A0A075B6M9 112 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 A0A075B6Q4 140 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CTDSP2O14595 271 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 FCMRO60667 390 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CCNYL3P0C7X3 344 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 IMPDH2P12268 514 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 RPS19P39019 145 aaKnown RBP17.1■□□□□ 0.33
MBD1-206ENST00000382948 PDX1P52945 283 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 SNRPNP63162 240 aaKnown RBP17.1■□□□□ 0.33
MBD1-206ENST00000382948 TNFRSF17Q02223 184 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 ST3GAL3Q11203 375 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 NFATC4Q14934 902 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 C6orf132Q5T0Z8 1188 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 USP30Q70CQ3 517 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 RRM2BQ7LG56 351 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 PRICKLE2Q7Z3G6 844 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 TRIM73Q86UV7 250 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 LRRC25Q8N386 305 aaPredicted RBP17.1■□□□□ 0.33
MBD1-206ENST00000382948 OR7G2Q8NG99 324 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CCL4L1Q8NHW4 92 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 TMEM163Q8TC26 289 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 NT5CQ8TCD5 201 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 SLC35A4Q96G79 324 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 CEP19Q96LK0 163 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 MS4A4EQ96PG1 132 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 SAP130Q9H0E3 1048 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 TRIM45Q9H8W5 580 aaPredicted RBP17.1■□□□□ 0.33
MBD1-206ENST00000382948 POLMQ9NP87 494 aaPredicted RBP17.1■□□□□ 0.33
MBD1-206ENST00000382948 KLHL28Q9NXS3 571 aa17.1■□□□□ 0.33
MBD1-206ENST00000382948 ZSCAN9O15535 394 aaPredicted RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 UBXN7O94888 489 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 ZIC2O95409 532 aaPredicted RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 KLF8O95600 359 aaPredicted RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 MAGP20916 626 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 CPN2P22792 545 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 PRKAR1BP31321 381 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 IFNA8P32881 189 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 ETV5P41161 510 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 ACTR1BP42025 376 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 ETV1P50549 477 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 ACTR1AP61163 376 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 TSPAN31Q12999 210 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 COL9A2Q14055 689 aaPredicted RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 FAM214AQ32MH5 1076 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 KLHL22Q53GT1 634 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 PHC2Q8IXK0 858 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 OR8D4Q8NGM9 314 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 OR52P1PQ8NH57 321 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 ZCCHC10Q8TBK6 192 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 TSACCQ96A04 125 aaPredicted RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 SLC22A18Q96BI1 424 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 TRMT61AQ96FX7 289 aaKnown RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 FAM46AQ96IP4 442 aaKnown RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 SMURF1Q9HCE7 757 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 CAB39Q9Y376 341 aaPredicted RBP17.09■□□□□ 0.33
MBD1-206ENST00000382948 HYKKA2RU49 373 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 DUXAA6NLW8 204 aa17.09■□□□□ 0.33
MBD1-206ENST00000382948 ZNF670-ZNF695F2Z2N8 137 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms