RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CCDC25Q86WR0 208 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 CENPLQ8N0S6 344 aaPredicted RBP16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 MAPK1IP1LQ8NDC0 245 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 OR4K17Q8NGC6 315 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 OR52B6Q8NGF0 335 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 FIG4Q92562 907 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 ADOQ96SZ5 270 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 SLC39A3Q9BRY0 314 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 ANKRA2Q9H9E1 313 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 PCDHA9Q9Y5H5 950 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 RAI1Q7Z5J4 1906 aaPredicted RBP16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 H0YC42 278 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 C16orf97H3BN30 126 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 HCRTR2O43614 444 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 GRK2P25098 689 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 IL12BP29460 328 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 TPD52P55327 224 aaPredicted RBP16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 FAM83EQ2M2I3 478 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 RAET1LQ5VY80 246 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 FAM219BQ5XKK7 198 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 OR2A2Q6IF42 318 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 SLC48A1Q6P1K1 146 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 PLEKHM3Q6ZWE6 761 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 PAGE2Q7Z2X7 111 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 CREG2Q8IUH2 290 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 L3MBTL4Q8NA19 623 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 NANOS1Q8WY41 292 aaKnown RBP16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 PINK1Q9BXM7 581 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 AHSPQ9NZD4 102 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 PRODH2Q9UF12 536 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 SLC12A4Q9UP95 1085 aa16.06■□□□□ 0.16
PDLIM4-202ENST00000379018 C1orf226A1L170 272 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 FRG2CA6NGY1 282 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 OR7A17O14581 309 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 ZSCAN12O43309 604 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 SCO2O43819 266 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 ATP1B1P05026 303 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 CSNK2A2P19784 350 aaPredicted RBP16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 KRT20P35900 424 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 KIR2DL2P43627 348 aaPredicted RBP16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 CORO7P57737 925 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 MAP4K2Q12851 820 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 IFT88Q13099 833 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 MROH9Q5TGP6 573 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 FRG2Q64ET8 278 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 C22orf34Q6ZV56 151 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 COMMD6Q7Z4G1 85 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 MEIOBQ8N635 442 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 PTGR2Q8N8N7 351 aaPredicted RBP16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 OR5M1Q8NGP8 315 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 FBF1Q8TES7 1133 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 TMEM171Q8WVE6 324 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 EFHD2Q96C19 240 aaPredicted RBP16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 PHF21BQ96EK2 531 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 DTNBP1Q96EV8 351 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 FRG2BQ96QU4 278 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 GSX2Q9BZM3 304 aa16.05■□□□□ 0.16
PDLIM4-202ENST00000379018 A0A087X1B8 175 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 OR6C70A6NIJ9 312 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 CCDC188H7C350 402 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ZIC3O60481 467 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ESRRBO95718 433 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 C2P06681 752 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 CRHP06850 196 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 DRD5P21918 477 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 PPICP45877 212 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 EMDP50402 254 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ATP5J2P56134 94 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 STX5Q13190 355 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 UAP1Q16222 522 aaPredicted RBP16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ALKBH2Q6NS38 261 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 LARP4Q71RC2 724 aaKnown RBP eCLIP16.04■□□□□ 0.164e-6■□□□□ 9
PDLIM4-202ENST00000379018 ZNF610Q8N9Z0 462 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 RHEBL1Q8TAI7 183 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 KAT2AQ92830 837 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 NSUN5Q96P11 429 aaKnown RBP16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 PSD3Q9NYI0 1048 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ELOVL5Q9NYP7 299 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 PPP4R1LQ9P1A2 415 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ZNF639Q9UID6 485 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ADAM29Q9UKF5 820 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 CES1P1Q9UKY3 287 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 PROCRQ9UNN8 238 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 ZNF780BQ9Y6R6 833 aa16.04■□□□□ 0.16
PDLIM4-202ENST00000379018 RNF212BA8MTL3 300 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 B4DXG7 233 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 H3BML4 177 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 EIF3HO15372 352 aaKnown RBP eCLIP16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 GUCY1B2O75343 617 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 CRLF1O75462 422 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 PEPDP12955 493 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 HK1P19367 917 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 LOXP28300 417 aaPredicted RBP16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 STX2P32856 288 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 PAFAH1B1P43034 410 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 PON3Q15166 354 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 KLC3Q6P597 504 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 METTL4Q8N3J2 472 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
PDLIM4-202ENST00000379018 MARK4Q96L34 752 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms