RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 OAZ1P54368 228 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 HADHBP55084 474 aaKnown RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 CRHR2Q13324 411 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 MELKQ14680 651 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 AFMIDQ63HM1 303 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 DRICH1Q6PGQ1 229 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 REC114Q7Z4M0 266 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 TMEM173Q86WV6 379 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 OR4D10Q8NGI6 311 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 LMLNQ96KR4 655 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 DOHHQ9BU89 302 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 A6NIZ1 184 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 NAT2P11245 290 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 SCGB1A1P11684 91 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 HTR1EP28566 365 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 WNT4P56705 351 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 RAP1BP61224 184 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 CES5AQ6NT32 575 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 PARP16Q8N5Y8 322 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 OR51Q1Q8NH59 317 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 IMP4Q96G21 291 aaKnown RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 OR10A5Q9H207 317 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 PCDHB10Q9UN67 800 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 TAAR5O14804 337 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 AQP9O43315 295 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 ASGR1P07306 291 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 H2BFMP0C1H6 154 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 RAB11AP62491 216 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 TEKQ02763 1124 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 RBP7Q96R05 134 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 CMSS1Q9BQ75 279 aaKnown RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 SLC29A3Q9BZD2 475 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 AGO1Q9UL18 857 aaKnown RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 MTX2O75431 263 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 BMP1P13497 986 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 NME1P15531 152 aaKnown RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 GOT1P17174 413 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 TNFRSF17Q02223 184 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 GPR119Q8TDV5 335 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 GRHL3Q8TE85 626 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 REEP6Q96HR9 211 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 C1orf198Q9H425 327 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 ZNF442Q9H7R0 627 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 DISP2A7MBM2 1401 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 A0A1W2PPK0 400 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 PDZD11Q5EBL8 140 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 C6orf89Q6UWU4 347 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 KIAA0907Q7Z7F0 614 aaPredicted RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 FJX1Q86VR8 437 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 FAAP24Q9BTP7 215 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 MYO7AQ13402 2215 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 A0A1W2PQ45 241 aaPredicted RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 A0A1W2PQY0 241 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 ZNF17P17021 662 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 ZP3P21754 424 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 HNF4GQ14541 408 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 SLC25A52Q3SY17 297 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 SIGIRRQ6IA17 410 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 BPIFCQ8NFQ6 507 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 FAM110BQ8TC76 370 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 SLC2A14Q8TDB8 520 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 SORCS2Q96PQ0 1159 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 KCNQ5Q9NR82 932 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 URGCP-MRPS24S4R325 110 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 PLB1Q6P1J6 1458 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 ACOD1A6NK06 481 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 UMAD1C9J7I0 102 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 SRPX2O60687 465 aaPredicted RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 PLGP00747 810 aaPredicted RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 NSG1P42857 185 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 C1QTNF8P60827 252 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 FAM183BPQ6ZVS7 135 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 VRK3Q8IV63 474 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 RBFOX1Q9NWB1 397 aaKnown RBP8.34□□□□□ -1.07
LIG3-202ENST00000378526 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 CLEC4EQ9ULY5 219 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 ERVW-1Q9UQF0 538 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 SALL1Q9NSC2 1324 aa8.34□□□□□ -1.07
LIG3-202ENST00000378526 A0A1B0GVT2 93 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 ACKR2O00590 384 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 SLC37A4O43826 429 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 FBXO24O75426 580 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 BCHEP06276 602 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 SYPP08247 313 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 SULT1A3P0DMM9 295 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 SULT1A4P0DMN0 295 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 RPL17P18621 184 aaKnown RBP8.34□□□□□ -1.08
LIG3-202ENST00000378526 FUT4P22083 530 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 AMTP48728 403 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 MAP2K6P52564 334 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 CCINQ13939 588 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 CLPPQ16740 277 aaPredicted RBP8.34□□□□□ -1.08
LIG3-202ENST00000378526 PPM1JQ5JR12 505 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 SLC18B1Q6NT16 456 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 NUDT13Q86X67 352 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 EID2Q8N6I1 236 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 OR5D16Q8NGK9 328 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 CPNE4Q96A23 557 aaPredicted RBP8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms