RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TRIM46Q7Z4K8 759 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 HS6ST3Q8IZP7 471 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 DNAJB8Q8NHS0 232 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 GTPBP3Q969Y2 492 aaKnown RBP11.19□□□□□ -0.62
NPHP4-202ENST00000378161 UPRTQ96BW1 309 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 GPR22Q99680 433 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 SMPD4Q9NXE4 827 aa11.19□□□□□ -0.62
NPHP4-202ENST00000378161 A8MT66 165 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 MATN3O15232 486 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 TLR5O60602 858 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 SLC10A3P09131 477 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 COX5BP10606 129 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 ABCD3P28288 659 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 MAP3K8P41279 467 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 DNAJB13P59910 316 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 CD81P60033 236 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 IRF4Q15306 451 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 RGS7BPQ6MZT1 257 aaPredicted RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 PDZD3Q86UT5 571 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 NUDT13Q86X67 352 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 PTRH1Q86Y79 214 aaKnown RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 NAXDQ8IW45 347 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 FAM122AQ96E09 287 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 WDFY2Q96P53 400 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 SLC25A51Q9H1U9 297 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 CHRDQ9H2X0 955 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 SMIM35A0A1B0GVV1 85 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 MGAT4DA6NG13 374 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 LRRTM2O43300 516 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 EEDO75530 441 aaKnown RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 CRYBB1P53674 252 aaPredicted RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 LILRA4P59901 499 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 C1QTNF8P60827 252 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 NAE1Q13564 534 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF460Q14592 562 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 TAF13Q15543 124 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 ODF4Q2M2E3 257 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF730Q6ZMV8 503 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 PHACTR4Q8IZ21 702 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 ADAMTS19Q8TE59 1207 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 SETD7Q8WTS6 366 aaKnown RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 OR5M11Q96RB7 305 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 RAD18Q9NS91 495 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 NDUFS8O00217 210 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 OTCP00480 354 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 MT-ND4LP03901 98 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 GPX3P22352 226 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 LMO2P25791 158 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 MAPK9P45984 424 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 PRR5P85299 388 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 PRKCZQ05513 592 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 LCP2Q13094 533 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 MANEAQ5SRI9 462 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 ABLIM2Q6H8Q1 611 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 OR10K2Q6IF99 312 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 ZBED6CLQ96FA7 236 aaPredicted RBP11.18□□□□□ -0.62
NPHP4-202ENST00000378161 MIXL1Q9H2W2 232 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 EXO5Q9H790 373 aa11.18□□□□□ -0.62
NPHP4-202ENST00000378161 H7C4K7 107 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 TCF21O43680 179 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 AOC2O75106 756 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 IFNA2P01563 188 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 SLC2A5P22732 501 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 PITPNBP48739 271 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 SLC39A12Q504Y0 691 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 SEZ6L2Q6UXD5 910 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 CERS6Q6ZMG9 384 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 ARMC10Q8N2F6 343 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 OR2G2Q8NGZ5 317 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 EXTL1Q92935 676 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 ELF4Q99607 663 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-202ENST00000378161 NUDT16L1Q9BRJ7 211 aaKnown RBP11.17□□□□□ -0.62
NPHP4-202ENST00000378161 GGACTQ9BVM4 153 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 PHLPP1O60346 1717 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 ADAMTS7Q9UKP4 1686 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 DGKAP23743 735 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 DIO3P55073 304 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 CDH12P55289 794 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 PAFAH1B3Q15102 231 aaKnown RBP11.17□□□□□ -0.62
NPHP4-202ENST00000378161 GTDC1Q4AE62 458 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 PDZD11Q5EBL8 140 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 TSTD2Q5T7W7 516 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 SMAP2Q8WU79 429 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-202ENST00000378161 C7orf34Q96L11 122 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 FCRL5Q96RD9 977 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 RNF32Q9H0A6 362 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 VNN3Q9NY84 501 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF230Q9UIE0 474 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-202ENST00000378161 USP22Q9UPT9 525 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 A8MXK9 166 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 CASC3O15234 703 aaKnown RBP11.17□□□□□ -0.62
NPHP4-202ENST00000378161 UBXN7O94888 489 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 ENDOD1O94919 500 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 MATN4O95460 622 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 APBB3O95704 486 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 FGF2P09038 288 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms