RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TPBGQ13641 420 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 UAP1L1Q3KQV9 507 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 SYT14P1Q58G82 188 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 KRT78Q8N1N4 520 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 PLA2G15Q8NCC3 412 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 ZNF680Q8NEM1 530 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 UFD1Q92890 307 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 EXOSC8Q96B26 276 aaKnown RBP15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 CREB3L1Q96BA8 519 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 NUS1Q96E22 293 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 GPR137Q96N19 417 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 TOX2Q96NM4 488 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 ATF6BQ99941 703 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 A4GALTQ9NPC4 353 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 SEMA3GQ9NS98 782 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 COQ3Q9NZJ6 369 aa15.64■□□□□ 0.09
PCDHA1-201ENST00000378133 C5orf42Q9H799 3197 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 PRR23AA6NEV1 266 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 HMGN4O00479 90 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 NCR1O76036 304 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 PIN1Q13526 163 aaPredicted RBP15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 ZNF77Q15935 545 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 PGBD2Q6P3X8 592 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 ANKRD53Q8N9V6 530 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 SLC7A13Q8TCU3 470 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 UCN3Q969E3 161 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 C17orf62Q9BQA9 187 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 MVB12BQ9H7P6 319 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 TAC3Q9UHF0 121 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 TBX21Q9UL17 535 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 MGAT4AQ9UM21 535 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 NCKAP1Q9Y2A7 1128 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 FEZF1A0PJY2 475 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 PCP4L1A6NKN8 68 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 SGK494L7N484 410 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 FAAHO00519 579 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 PAPLNO95428 1278 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 RHOP08100 348 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 AGFG1P52594 562 aaKnown RBP15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 ALDH6A1Q02252 535 aaKnown RBP15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 MESP2Q0VG99 397 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 LRRC32Q14392 662 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 KHDRBS2Q5VWX1 349 aaKnown RBP15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 BICRALQ6AI39 1079 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 SZRD1Q7Z422 152 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 GHDCQ8N2G8 530 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 ZFP41Q8N8Y5 198 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 ZNF582Q96NG8 517 aaPredicted RBP15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 FOLH1BQ9HBA9 442 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 CUEDC1Q9NWM3 386 aaPredicted RBP15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 SEC14L3Q9UDX4 400 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 NOTCH4Q99466 2003 aa15.63■□□□□ 0.09
PCDHA1-201ENST00000378133 HIDE1A8MVS5 230 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 LZTS3O60299 673 aaPredicted RBP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 PTBP1P26599 531 aaKnown RBP eCLIP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 FGF9P31371 208 aaPredicted RBP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 GABRA5P31644 462 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 BSGP35613 385 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 RGS1Q08116 209 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 FCN2Q15485 313 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 C3orf38Q5JPI3 329 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 C1orf53Q5VUE5 145 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 OLIG3Q7RTU3 272 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 LRRC17Q8N6Y2 441 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 RAD51AP1Q96B01 352 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 SENP5Q96HI0 755 aaPredicted RBP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 ZNF354BQ96LW1 612 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 POLDIP3Q9BY77 421 aaKnown RBP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 HDHD2Q9H0R4 259 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 MED28Q9H204 178 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 PIGUQ9H490 435 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 DPEP2Q9H4A9 486 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 SIRT3Q9NTG7 399 aaPredicted RBP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 ZSCAN32Q9NX65 697 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 PHF11Q9UIL8 331 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 MYO10Q9HD67 2058 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 A0A0A6YYJ9 748 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 KCNJ13O60928 360 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 C6P13671 934 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 ZNF250P15622 560 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 KCNJ5P48544 419 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 ST8SIA6P61647 398 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 CNTN1Q12860 1018 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 SYPL1Q16563 259 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 ARHGAP15Q53QZ3 475 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 LCTLQ6UWM7 567 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 HMGN2P46Q86SG4 172 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 OR2L2Q8NH16 312 aa15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 PAWRQ96IZ0 340 aaKnown RBP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 TEFMQ96QE5 360 aaKnown RBP15.62■□□□□ 0.09
PCDHA1-201ENST00000378133 C17orf113A0A1B0GUU1 675 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 TRIM77I1YAP6 450 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 CHP2O43745 196 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 SLC28A2O43868 658 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 OR12D1P0DN82 309 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 IL32P24001 234 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 ERVFC1P60507 584 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 LSM11P83369 360 aaKnown RBP eCLIP15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 GINS1Q14691 196 aa15.61■□□□□ 0.09
PCDHA1-201ENST00000378133 MZT2AQ6P582 158 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms