RNA–Protein interactions for RNA: ENST00000376227.3

CCDC22-201, Transcript of coiled-coil domain containing 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC22, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-201ENST00000376227 UCN3Q969E3 161 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 RIPOR3Q96MK2 946 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 FERD3LQ96RJ6 166 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 MED17Q9NVC6 651 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 RBFOX1Q9NWB1 397 aaKnown RBP14.26□□□□□ -0.13
CCDC22-201ENST00000376227 KLHL21Q9UJP4 597 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 NDRG2Q9UN36 371 aaKnown RBP14.26□□□□□ -0.13
CCDC22-201ENST00000376227 LIPT1Q9Y234 373 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 POLHQ9Y253 713 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 MTCL1Q9Y4B5 1905 aaKnown RBP14.26□□□□□ -0.13
CCDC22-201ENST00000376227 LTBP2Q14767 1821 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 PRRT4C9JH25 899 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 CCNYL3P0C7X3 344 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 CSF2RAP15509 400 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 LSM11P83369 360 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC22-201ENST00000376227 FUT5Q11128 374 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 CNIH2Q6PI25 160 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 OLIG3Q7RTU3 272 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 PRICKLE2Q7Z3G6 844 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 ING5Q8WYH8 240 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 ARHGDIGQ99819 225 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 RAB11FIP5Q9BXF6 653 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 DEC1Q9P2X7 70 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 CCDC88CQ9P219 2028 aa14.26□□□□□ -0.13
CCDC22-201ENST00000376227 SMIM30A4D0T7 59 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 A6NL46 340 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 EMC8O43402 210 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 HNRNPA1P09651 372 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ERP29P30040 261 aaKnown RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 SSTR4P31391 388 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ATP6V1E1P36543 226 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 TGM3Q08188 693 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ACSM1Q08AH1 577 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 IL18Q14116 193 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 TIGD3Q6B0B8 471 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 KIAA1161Q6NSJ0 714 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ZNF793Q6ZN11 406 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 NANOGNBQ7Z5D8 188 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 GRASPQ7Z6J2 395 aaPredicted RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 HMGN2P46Q86SG4 172 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 LHFPL3Q86UP9 236 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 TCTE3Q8IZS6 198 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 TP53I13Q8NBR0 393 aaPredicted RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 OR8D4Q8NGM9 314 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 NEIL3Q8TAT5 605 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 OTULINQ96BN8 352 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 FAM46AQ96IP4 442 aaKnown RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 RNF170Q96K19 258 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ZFYVE19Q96K21 471 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 NRTNQ99748 197 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 KRCC1Q9NPI7 259 aaPredicted RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 CNIH4Q9P003 139 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 H2AFY2Q9P0M6 372 aaPredicted RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 PHF11Q9UIL8 331 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 KIAA1549LQ6ZVL6 1849 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 GLOD5A6NK44 160 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 CPSF4LA6NMK7 179 aaKnown RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 SLC19A2O60779 497 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 PSKH1P11801 424 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 CSNK2A2P19784 350 aaPredicted RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 APEX1P27695 318 aaKnown RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 MPIP34949 423 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 CD83Q01151 205 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 CLEC12AQ5QGZ9 265 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 SHFQ7M4L6 423 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ZNF438Q7Z4V0 828 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 C11orf74Q86VG3 221 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 MARCH9Q86YJ5 346 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 CCDC116Q8IYX3 515 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 UBE2J2Q8N2K1 259 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 LINC01555Q8NAE3 123 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 DUSP18Q8NEJ0 188 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 OR52N1Q8NH53 320 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ZNF296Q8WUU4 475 aaPredicted RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 FYTTD1Q96QD9 318 aaKnown RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 TMED9Q9BVK6 235 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 PPP1R3EQ9H7J1 279 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 TBC1D17Q9HA65 648 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 CACYBPQ9HB71 228 aaKnown RBP14.25□□□□□ -0.13
CCDC22-201ENST00000376227 TM7SF3Q9NS93 570 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 ASB6Q9NWX5 421 aa14.25□□□□□ -0.13
CCDC22-201ENST00000376227 FAM240BA0A1B0GVZ2 78 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 GSAPA4D1B5 854 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 GPR89AB7ZAQ6 455 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 ARHGEF9O43307 516 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 ERI3O43414 337 aaKnown RBP14.24□□□□□ -0.13
CCDC22-201ENST00000376227 HPGDSO60760 199 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 GPR89BP0CG08 455 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 CEBPBP17676 345 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 GALP22466 123 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 HIST1H1TP22492 207 aaPredicted RBP14.24□□□□□ -0.13
CCDC22-201ENST00000376227 FPR3P25089 353 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 P2RY2P41231 377 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 OMPP47874 163 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 RAB28P51157 221 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 ARFIP1P53367 373 aa14.24□□□□□ -0.13
CCDC22-201ENST00000376227 RACK1P63244 317 aaKnown RBP14.24□□□□□ -0.13
CCDC22-201ENST00000376227 TMEM107Q6UX40 140 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms