RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 COX4I2Q96KJ9 171 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 SFXN2Q96NB2 322 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 BTBD9Q96Q07 612 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 LRRC1Q9BTT6 524 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 RAB17Q9H0T7 212 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 ELOVL6Q9H5J4 265 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF395Q9H8N7 513 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-202ENST00000374426 ANKRA2Q9H9E1 313 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 C6orf203Q9P0P8 240 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-202ENST00000374426 PRODH2Q9UF12 536 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 PSME2Q9UL46 239 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 DLGAP4Q9Y2H0 992 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 WIF1Q9Y5W5 379 aa12.49□□□□□ -0.41
CXCL12-202ENST00000374426 DEFB108AA8MXU0 73 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 MSTNO14793 375 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 ARHGEF9O43307 516 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 CTIFO43310 598 aaKnown RBP12.48□□□□□ -0.41
CXCL12-202ENST00000374426 ZIC3O60481 467 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 NME6O75414 186 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-202ENST00000374426 REM1O75628 298 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 LY6G6DO95868 133 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 PDYNP01213 254 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 RBP1P09455 135 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 CT45A8P0DMV1 189 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 CT45A9P0DMV2 189 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 MAGEA12P43365 314 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 ALDH9A1P49189 494 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 CORO7P57737 925 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 EEF1A1P68104 462 aaKnown RBP12.48□□□□□ -0.41
CXCL12-202ENST00000374426 CT45A2Q5DJT8 189 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF628Q5EBL2 1059 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 EEF1A1P5Q5VTE0 462 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 OR5M10Q6IEU7 315 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 LETMD1Q6P1Q0 360 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 SCIMPQ6UWF3 145 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 LRRC75A-AS1Q8N1F1 130 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 RNF138Q8WVD3 245 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 STARD4Q96DR4 205 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 SLC35A4Q96G79 324 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 WFIKKN1Q96NZ8 548 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 ADOQ96SZ5 270 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 PIP5K1AQ99755 562 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 BRF2Q9HAW0 419 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 XPR1Q9UBH6 696 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 HEY2Q9UBP5 337 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 MRPS18CQ9Y3D5 142 aaKnown RBP12.48□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF780BQ9Y6R6 833 aa12.48□□□□□ -0.41
CXCL12-202ENST00000374426 ESYT3A0FGR9 886 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 C17orf51A8MQB3 221 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 FAM171A2A8MVW0 826 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 TSPAN2O60636 221 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 SMPD2O60906 423 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 ABCB7O75027 752 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
CXCL12-202ENST00000374426 CRHP06850 196 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 RPS17P08708 135 aaKnown RBP12.47□□□□□ -0.41
CXCL12-202ENST00000374426 TSPAN8P19075 237 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 TCEA1P23193 301 aaKnown RBP12.47□□□□□ -0.41
CXCL12-202ENST00000374426 GRK2P25098 689 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 CCKARP32238 428 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 PCYT1AP49585 367 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 GAS1P54826 345 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 B3GALT5-AS1P59052 145 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 VWA1Q6PCB0 445 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
CXCL12-202ENST00000374426 NPSR1Q6W5P4 371 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 P3H2Q8IVL5 708 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 C1orf52Q8N6N3 182 aaKnown RBP12.47□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF675Q8TD23 568 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 SELENOMQ8WWX9 145 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 VSTM2LQ96N03 204 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 HBEGFQ99075 208 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 FAIM2Q9BWQ8 316 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 ACSS3Q9H6R3 686 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 KLHL28Q9NXS3 571 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 ZNF225Q9UK10 706 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 DKKL1Q9UK85 242 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 UTS2RQ9UKP6 389 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 TMCO1Q9UM00 188 aa12.47□□□□□ -0.41
CXCL12-202ENST00000374426 SONP18583 2426 aaKnown RBP12.47□□□□□ -0.41
CXCL12-202ENST00000374426 H7C1Q1 480 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 SMIM24O75264 130 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 OTCP00480 354 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 CTAGE8P0CG41 777 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 DPP4P27487 766 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 CD79BP40259 229 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 MC3RP41968 323 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 CDH13P55290 713 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 CLDN15P56746 228 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 TRA2BP62995 288 aaKnown RBP12.46□□□□□ -0.41
CXCL12-202ENST00000374426 EFR3AQ14156 821 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 BCL2A1Q16548 175 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 LARP4Q71RC2 724 aaKnown RBP eCLIP12.46□□□□□ -0.41
CXCL12-202ENST00000374426 TAOK1Q7L7X3 1001 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 BTLAQ7Z6A9 289 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 PRIMA1Q86XR5 153 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 CTAGE4Q8IX94 777 aa12.46□□□□□ -0.41
CXCL12-202ENST00000374426 CCDC116Q8IYX3 515 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms