RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ERVK-19Q9WJR5 959 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 WDR45Q9Y484 360 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 AP4B1Q9Y6B7 739 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 IGLV3-12A0A075B6K2 115 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 TCRBV16S1A1N1A0A5B0 115 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 C17orf105B2RV13 164 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 DENRO43583 198 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 NKX2-2O95096 273 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 ONECUT2O95948 504 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 RPSAP08865 295 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 CCKBRP32239 447 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 DAG1Q14118 895 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 NSDHLQ15738 373 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 OLIG3Q7RTU3 272 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 TSEN54Q7Z6J9 526 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 BMPERQ8N8U9 685 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 OSBPL10Q9BXB5 764 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 PINK1Q9BXM7 581 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 AMBRA1Q9C0C7 1298 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 CACYBPQ9HB71 228 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 FOLH1BQ9HBA9 442 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 FBXO8Q9NRD0 319 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 PNO1Q9NRX1 252 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 SEMA4GQ9NTN9 838 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 AKAP7Q9P0M2 348 aaPredicted RBP24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 CTSFQ9UBX1 484 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 MKL2Q9ULH7 1088 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 SAMHD1Q9Y3Z3 626 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 PCDHGA8Q9Y5G5 932 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 ENPP4Q9Y6X5 453 aa24.48■■□□□ 1.51
ATPAF1-202ENST00000371937 PRAMEF25A6NGN4 478 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 TTC36A6NLP5 189 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 HRKO00198 91 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 HPRP00739 348 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 FPR1P21462 350 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 GABRA3P34903 492 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 MC2RQ01718 297 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 ILKQ13418 452 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 PUM1Q14671 1186 aaKnown RBP eCLIP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 ELAVL1Q15717 326 aaKnown RBP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 DCST2Q5T1A1 773 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 TMEM151BQ8IW70 566 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 TSLPQ969D9 159 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 EPYCQ99645 322 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 CDC6Q99741 560 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 RBM4BQ9BQ04 359 aaKnown RBP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 RBM4Q9BWF3 364 aaKnown RBP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 OR10A5Q9H207 317 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 RXFP3Q9NSD7 469 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 C14orf105Q9NVL8 296 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 CLCA3PQ9Y6N3 262 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 NUP210LQ5VU65 1888 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 FCMRO60667 390 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 CBFA2T3O75081 653 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 STX11O75558 287 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 DNAJB5O75953 348 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 PABPC4LP0CB38 370 aaKnown RBP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 RHCEP18577 417 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 POU6F2P78424 691 aaPredicted RBP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 FRRS1Q6ZNA5 592 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 PLPP5Q8NEB5 264 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 STT3BQ8TCJ2 826 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 PTPMT1Q8WUK0 201 aaPredicted RBP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 PMM1Q92871 262 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 VSTM2LQ96N03 204 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 PRRX2Q99811 253 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 VN1R1Q9GZP7 353 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 ZNF350Q9GZX5 532 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 SMPD3Q9NY59 655 aaPredicted RBP24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 VNN3Q9NY84 501 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 PRODH2Q9UF12 536 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 SLC9A8Q9Y2E8 581 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 IFT52Q9Y366 437 aa24.47■■□□□ 1.51
ATPAF1-202ENST00000371937 CPNE3O75131 537 aaKnown RBP24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 ALPLP05186 524 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 E2F1Q01094 437 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 PPP1R8Q12972 351 aaKnown RBP24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 NHSL2Q5HYW2 709 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 ZNF311Q5JNZ3 666 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 TMEM179BQ7Z7N9 219 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 PIK3R3Q92569 461 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 FBXL20Q96IG2 436 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 PIP5K1AQ99755 562 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 RSPO3Q9BXY4 272 aaPredicted RBP24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 POLE3Q9NRF9 147 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 MKLN1Q9UL63 735 aa24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 MAGED1Q9Y5V3 778 aaPredicted RBP24.46■■□□□ 1.51
ATPAF1-202ENST00000371937 RECKO95980 971 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 ZGLP1P0C6A0 271 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 RRM2P31350 389 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 CSRP2Q16527 193 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 C6orf52Q5T4I8 152 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 ZNF385CQ66K41 422 aaPredicted RBP24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 TYW3Q6IPR3 259 aaKnown RBP24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 OVCH1Q7RTY7 1134 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 CARM1Q86X55 608 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 PEX5LQ8IYB4 626 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 PRSS58Q8IYP2 241 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 ZNF615Q8N8J6 731 aa24.45■■□□□ 1.5
ATPAF1-202ENST00000371937 SENP5Q96HI0 755 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms