RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TAF1AQ15573 450 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-206ENST00000367253 LRRC26Q2I0M4 334 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF404Q494X3 552 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 HIST2H3PS2Q5TEC6 136 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 FAM86B1Q8N7N1 296 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF454Q8N9F8 522 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 OR5L1Q8NGL2 311 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 SCRN2Q96FV2 425 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 C16orf58Q96GQ5 468 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 WDR55Q9H6Y2 383 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-206ENST00000367253 LRRC19Q9H756 370 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 SEC61A2Q9H9S3 476 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 SLC22A11Q9NSA0 550 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 C19orf12Q9NSK7 152 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 LRIT1Q9P2V4 623 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 APC2O95996 2303 aa8.23□□□□□ -1.09
SYNE1-206ENST00000367253 PLIN4Q96Q06 1357 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 BORCS7-ASMTA0A0B4J1R7 106 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 INMT-MINDY4F8WBC2 141 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 EI24O14681 340 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ADAM12O43184 909 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ANXA3P12429 323 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ABHD18Q0P651 414 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 MFSD13AQ14CX5 517 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SLC14A2Q15849 920 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 DEFB133Q30KQ1 61 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 RTP2Q5QGT7 225 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 FAM69BQ5VUD6 431 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TBC1D20Q96BZ9 403 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 PCED1BQ96HM7 432 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 GLTPQ9NZD2 209 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 DNAJB11Q9UBS4 358 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CD84Q9UIB8 345 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 WDR45Q9Y484 360 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 MAFBQ9Y5Q3 323 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 NID2Q14112 1375 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF816-ZNF321PA0A0X1KG74 233 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 VSTM2BA6NLU5 285 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 MANBAO00462 879 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 B4GALT5O43286 388 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SEC14L5O43304 696 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TMBIM6P55061 237 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 RSU1Q15404 277 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SAPCD1Q5SSQ6 148 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TMEM161BQ8NDZ6 487 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 OR4A15Q8NGL6 344 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 OR9A2Q8NGT5 310 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 OR8S1Q8NH09 359 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 XAGE5Q8WWM1 108 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 RASD2Q96D21 266 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 COQ8BQ96D53 544 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 GPA33Q99795 319 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 POTEKPQ9BYX7 375 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CPNE7Q9UBL6 633 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 COPS3Q9UNS2 423 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SCML2Q9UQR0 700 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 WIF1Q9Y5W5 379 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CDH10Q9Y6N8 788 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 KIAA1324LA8MWY0 1029 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ALOX15BO15296 676 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TCF21O43680 179 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 RFPL1O75677 317 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 RFPL2O75678 378 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CHMP24386 653 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 IL3RAP26951 378 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 AQP1P29972 269 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CSNK2A1P68400 391 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SRYQ05066 204 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TGFBIQ15582 683 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TRIP6Q15654 476 aaKnown RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 IL23RQ5VWK5 629 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ADIPOR2Q86V24 386 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 BOLLQ8N9W6 283 aaKnown RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CHDHQ8NE62 594 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TMEM80Q96HE8 168 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TREX2Q9BQ50 279 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 MECRQ9BV79 373 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 HINT2Q9BX68 163 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SEPSECSQ9HD40 501 aaKnown RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 IL20Q9NYY1 176 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 COLQQ9Y215 455 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ANKRD36CQ5JPF3 1778 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 F5H0A9 414 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 PHOX2AO14813 284 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 SIGLEC6O43699 453 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 JRKO75564 520 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ATE1O95260 518 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TSPAN12O95859 305 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 IL7RP16871 459 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 PGCP20142 388 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 POU3F2P20265 443 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 PROZP22891 400 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 MIPP30301 263 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 GGT2P36268 569 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 POLR2JP52435 117 aaKnown RBP8.22□□□□□ -1.09
SYNE1-206ENST00000367253 CD47Q08722 323 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 ARFRP1Q13795 201 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 TRAPPC6BQ86SZ2 158 aa8.22□□□□□ -1.09
SYNE1-206ENST00000367253 C2orf73Q8N5S3 287 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms