RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 A0A087WZY1 265 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 CRTAPO75718 401 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 DUOXA1Q1HG43 343 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 OR4C5Q8NGB2 326 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 MSLNLQ96KJ4 702 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 PCDHB1Q9Y5F3 818 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 EDNRBP24530 442 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 HMGN2P46Q86SG4 172 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 NEURL2Q9BR09 285 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 SAP130Q9H0E3 1048 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 TGFB1I1O43294 461 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 EVX2Q03828 476 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 PDGFRLQ15198 375 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 DPPA4Q7L190 304 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 KLBQ86Z14 1044 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 ZNF619Q8N2I2 560 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 OR2AG1Q9H205 316 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 AKIP1Q9NQ31 210 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 SDHDO14521 159 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 NFATC1O95644 943 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 IRF2P14316 349 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 OPCMLQ14982 345 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 PTPRRQ15256 657 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 VASNQ6EMK4 673 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 FAM122BQ7Z309 247 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 A0A1B0GUL6 1792 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 TMEM231Q9H6L2 316 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 LSM5Q9Y4Y9 91 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 SYN3O14994 580 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 LRCH4O75427 683 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 IL1R2P27930 398 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 Q5PR19 223 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 BRAT1Q6PJG6 821 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 KDM8Q8N371 416 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 UROC1Q96N76 676 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 DDOQ99489 341 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 FTHL17Q9BXU8 183 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 OR51I1Q9H343 314 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 FNIP2Q9P278 1114 aa10.56□□□□□ -0.72
CDC42BPA-205ENST00000366769 COL13A1Q5TAT6 717 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 OR10Z1Q8NGY1 313 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 ARNTL2Q8WYA1 636 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 RHOVQ96L33 236 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 ACTRT3Q9BYD9 372 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 ATRNO75882 1429 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 SOX1O00570 391 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 GOT2P00505 430 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 NQO2P16083 231 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 OR52E4Q8NGH9 312 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 SORT1Q99523 831 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 CMKLR1Q99788 373 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 MRPS17Q9Y2R5 130 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 RNF11Q9Y3C5 154 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 TRAPPC13A5PLN9 417 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 PLP2Q04941 152 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 SMAD4Q13485 552 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 TMEM151BQ8IW70 566 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 TCEAL2Q9H3H9 227 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 KCNJ16Q9NPI9 418 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 EIF2B3Q9NR50 452 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 AMY2BP19961 511 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 PAPD5Q8NDF8 572 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 OR5B17Q8NGF7 314 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 PDCD1LG2Q9BQ51 273 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 KLHL21Q9UJP4 597 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 RNF13O43567 381 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 HTR1AP08908 422 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 TPT1P13693 172 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 GGT1P19440 569 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 PTAFRP25105 342 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 SLC5A12Q1EHB4 618 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 ZC3H14Q6PJT7 736 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 TMPPEQ6ZT21 453 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 ZNF584Q8IVC4 421 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 METTL27Q8N6F8 245 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 ZFPM2Q8WW38 1151 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 NUDT9Q9BW91 350 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 ADAP00813 363 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 INHAP05111 366 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 BAK1Q16611 211 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 STRADAQ7RTN6 431 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 SLC2A11Q9BYW1 496 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 TOLLIPQ9H0E2 274 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 NIPAL2Q9H841 368 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 MCM3APO60318 1980 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 NDUFS4O43181 175 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 GJB1P08034 283 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 RBMS1P29558 406 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 MPIP34949 423 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 RBMXP38159 391 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 CLCN4P51793 760 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 DSC2Q02487 901 aa10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 EXOSC2Q13868 293 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-205ENST00000366769 H3F3CQ6NXT2 135 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms