RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SLC46A3Q7Z3Q1 461 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR4C15Q8NGM1 316 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 SERINC1Q9NRX5 453 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 MGAT4AQ9UM21 535 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GABRR3A8MPY1 467 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 A8MVJ9 347 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 PIM1P11309 404 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 HOXD9P28356 352 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GATMP50440 423 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 KCNJ8Q15842 424 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GHDCQ8N2G8 530 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 MEIS3P2A8K0S8 358 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 PPP6CO00743 305 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CSF1P09603 554 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 GP1BBP13224 206 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 VAMP1P23763 118 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 LRIF1Q5T3J3 769 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 PRAMEF8Q5VWM4 474 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 PRAMEF7Q5VXH5 474 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF584Q8IVC4 421 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF615Q8N8J6 731 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 NLGN2Q8NFZ4 835 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 CD99L2Q8TCZ2 262 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR51E2Q9H255 320 aa11.19□□□□□ -0.62
CDC42BPA-202ENST00000366764 APBB3O95704 486 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 BCL2L15Q5TBC7 163 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 C12orf40Q86WS4 652 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMEM173Q86WV6 379 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 ACOT11Q8WXI4 607 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 PLXNB2O15031 1838 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 NPIPB15A6NHN6 443 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 PRLHRP49683 370 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 THAP4Q8WY91 577 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 COQ10AQ96MF6 247 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 TAS2R3Q9NYW6 316 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 AHCYP23526 432 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 ITGB7P26010 798 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 MAPK14Q16539 360 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 STEAP3Q658P3 488 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 Q6ZSR9 355 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 FAM46AQ96IP4 442 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 MKRN2Q9H000 416 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC39A1Q9NY26 324 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 TEX51A0A1B0GUA7 166 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 JUNDP17535 347 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 TNFSF8P32971 234 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 PRPS1P60891 318 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 DLEU7Q6UYE1 221 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMEM163Q8TC26 289 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 CD8B2A6NJW9 211 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZNF806P0C7X5 589 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 CD8BP10966 210 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 NPIPA5E9PKD4 350 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 PIPP12273 146 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 RNH1P13489 461 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 CYBAP13498 195 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 COQ8BQ96D53 544 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 SGTBQ96EQ0 304 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 NPIPA1Q9UND3 350 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 CDHR4A6H8M9 788 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 GLOD5A6NK44 160 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 DGKEP52429 567 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 ISL1P61371 349 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC35A2P78381 396 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARFRP1Q13795 201 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 HMBOX1Q6NT76 420 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR56B4Q8NH76 319 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMEM234Q8WY98 164 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 NEURL3Q96EH8 262 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 BTBD2Q9BX70 525 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 PGDP52209 483 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 UGT8Q16880 541 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 SLC29A4Q7RTT9 530 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 STOML3Q8TAV4 291 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 MN1Q10571 1320 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPA-202ENST00000366764 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SOCS7O14512 581 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 RPP14O95059 124 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 AHSA1O95433 338 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 PRSS56P0CW18 603 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 SRCP12931 536 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 NKX2-5P52952 324 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 ARL6IP1Q15041 203 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 RTP2Q5QGT7 225 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 HAGHLQ6PII5 290 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 TMED4Q7Z7H5 227 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 FAM124AQ86V42 546 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 METTL4Q8N3J2 472 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR2L3Q8NG85 312 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 GGHQ92820 318 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 TREX2Q9BQ50 279 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 HDHD5Q9BXW7 423 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 OR7A17O14581 309 aa11.17□□□□□ -0.62
CDC42BPA-202ENST00000366764 NR4A2P43354 598 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms