RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 TMEM120AQ9BXJ8 343 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 OR51B5Q9H339 312 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 SEMA4BQ9NPR2 832 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 DMRT3Q9NQL9 472 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 PNPOQ9NVS9 261 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 CRIM1Q9NZV1 1036 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 TSC22D4Q9Y3Q8 395 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 TNPO3Q9Y5L0 923 aaKnown RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 CHCHD2Q9Y6H1 151 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 AKAP6Q13023 2319 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 A0A0G2JND7 137 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 C2orf92A0A1B0GVN3 265 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 LRRC3CA6NJW4 275 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 PLPP1O14494 284 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 UGDHO60701 494 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 GPR75O95800 540 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 EPPINO95925 133 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 RAF1P04049 648 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 FGF4P08620 206 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 DRD2P14416 443 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 FOSL1P15407 271 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 EPORP19235 508 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 TACR1P25103 407 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 PTX3P26022 381 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 PIK3CGP48736 1102 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 TRPC1P48995 793 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 AQP5P55064 265 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 SLC37A1P57057 533 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 PCDH1Q08174 1060 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 DUSP8Q13202 625 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 RCAN2Q14206 197 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 ZNF267Q14586 743 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 LIPJQ5W064 366 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 OR52E8Q6IFG1 317 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 SCIMPQ6UWF3 145 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 PAMR1Q6UXH9 720 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 NUDT13Q86X67 352 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 CDC20BQ86Y33 519 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 GBP7Q8N8V2 638 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 RELL2Q8NC24 303 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 ZNF483Q8TF39 744 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 TP53INP1Q96A56 240 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 PPWD1Q96BP3 646 aaKnown RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 MBD6Q96DN6 1003 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 THOC1Q96FV9 657 aaKnown RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 ACTR8Q9H981 624 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 MARCOQ9UEW3 520 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 CNOT11Q9UKZ1 510 aaKnown RBP11.37□□□□□ -0.59
MRPL55-209ENST00000366735 PLEKHA6Q9Y2H5 1048 aa11.37□□□□□ -0.59
MRPL55-209ENST00000366735 KIAA1549Q9HCM3 1950 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 MTORP42345 2549 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 TUBAL3A6NHL2 446 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 HDAC3O15379 428 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 TRAPPC6AO75865 159 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 SUPT7LO94864 414 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 SIX3O95343 332 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-209ENST00000366735 RFPL3SP0C7P2 107 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 PIK3R1P27986 724 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 CEACAM8P31997 349 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-209ENST00000366735 OPRM1P35372 400 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 HNRNPH2P55795 449 aaKnown RBP11.36□□□□□ -0.59
MRPL55-209ENST00000366735 SORDQ00796 357 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 CRYZQ08257 329 aaKnown RBP11.36□□□□□ -0.59
MRPL55-209ENST00000366735 SF3A3Q12874 501 aaKnown RBP eCLIP11.36□□□□□ -0.597e-7■■■□□ 18.1
MRPL55-209ENST00000366735 LCP2Q13094 533 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 KEAP1Q14145 624 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 TOMM20Q15388 145 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 FAM91A1Q658Y4 838 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 C18orf63Q68DL7 685 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 EPGNQ6UW88 154 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 MTERF1Q99551 399 aaKnown RBP11.36□□□□□ -0.59
MRPL55-209ENST00000366735 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 ZDHHC2Q9UIJ5 367 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 PCTPQ9UKL6 214 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 CBLCQ9ULV8 474 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 CAMK2AQ9UQM7 478 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 CFL2Q9Y281 166 aa11.36□□□□□ -0.59
MRPL55-209ENST00000366735 ZNF469Q96JG9 3925 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-209ENST00000366735 MED12LQ86YW9 2145 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 CD8B2A6NJW9 211 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 EEF1E1-BLOC1S5C9J1V9 151 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 HRKO00198 91 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 UBFD1O14562 309 aaKnown RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 EEF1E1O43324 174 aaKnown RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 PROM1O43490 865 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 TRIM3O75382 744 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 ERN1O75460 977 aaKnown RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 HPNP05981 417 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 FAM58BPP0C7Q3 252 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 SLC35E2P0CK97 266 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 KITP10721 976 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 ARL1P40616 181 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 IDH3AP50213 366 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 CDK9P50750 372 aaKnown RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 RPS13P62277 151 aaKnown RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 CLCQ05315 142 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 FOXD4Q12950 439 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-209ENST00000366735 CUL3Q13618 768 aa11.35□□□□□ -0.59
MRPL55-209ENST00000366735 DAZAP2Q15038 168 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms