RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 A8MVM7 634 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 FAM72CH0Y354 149 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 K7EQS6 105 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 HCRTO43612 131 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 GRAP2O75791 330 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF432O94892 652 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 MT-ND2P03891 347 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 UMODP07911 640 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 HMBSP08397 361 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 CLTAP09496 248 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 CCDC192P0DO97 292 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 CPA3P15088 417 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 RPL35AP18077 110 aaKnown RBP4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 CYP3A5P20815 502 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 CSRP1P21291 193 aaKnown RBP4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 ELAVL4P26378 380 aaKnown RBP4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 PTGER3P43115 390 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 DCDC1P59894 354 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC3A1Q07837 685 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 PDIA5Q14554 519 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 DMC1Q14565 340 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM132DQ14C87 1099 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 FGD3Q5JSP0 725 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 FAM72AQ5TYM5 149 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 WSCD1Q658N2 575 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 RUSC1-AS1Q66K80 236 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 ETFRF1Q6IPR1 90 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 FAM72DQ6L9T8 149 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 MEX3BQ6ZN04 569 aaKnown RBP4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 RABEPKQ7Z6M1 372 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 FAM72BQ86X60 149 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 LACC1Q8IV20 430 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 OR5AP2Q8NGF4 316 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 RPLP0P6Q8NHW5 317 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 GGHQ92820 318 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 PKMYT1Q99640 499 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 NKX3-1Q99801 234 aaPredicted RBP4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 DDX50Q9BQ39 737 aaKnown RBP4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 TCHPQ9BT92 498 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 ECT2Q9H8V3 914 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 HACD3Q9P035 362 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 FETUBQ9UGM5 382 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 KCNK6Q9Y257 313 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 PHLPP2Q6ZVD8 1323 aa4.88□□□□□ -1.63
RNU4-39P-201ENST00000362455 MYH15Q9Y2K3 1946 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 MYH9P35579 1960 aaKnown RBP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 KALRNO60229 2985 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 MAST4O15021 2626 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 SPAARA0A1B0GVQ0 90 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 CCDC162PA2VCL2 907 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 IFITM10A6NMD0 228 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 ANKRD63C9JTQ0 380 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 CLDN3O15551 220 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 MLNRO43193 412 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 CYTIPO60759 359 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 SAP30O75446 220 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 BCAS2O75934 225 aaPredicted RBP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 APBB3O95704 486 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 PATE4P0C8F1 98 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 PRKAR1AP10644 381 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 CEACAM1P13688 526 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 CHRNB4P30926 498 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 OPRD1P41143 372 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 OR3A2P47893 321 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 SLC12A3P55017 1021 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 GFPT1Q06210 699 aaPredicted RBP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 PLD1Q13393 1074 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF77Q15935 545 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 CCDC92Q53HC0 331 aaPredicted RBP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZSCAN30Q86W11 494 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 THEM5Q8N1Q8 247 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM99Q8N816 258 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TCEANCQ8N8B7 351 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 ERMNQ8TAM6 284 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 GATAD1Q8WUU5 269 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 RLN3Q8WXF3 142 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 CFAP36Q96G28 342 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM237Q96Q45 408 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 PLIN2Q99541 437 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 P2RY13Q9BPV8 354 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TSPYL1Q9H0U9 437 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZDHHC4Q9NPG8 344 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM9BQ9NQ34 198 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 GCNT4Q9P109 453 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 UBQLN1Q9UMX0 589 aaKnown RBP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TCF19Q9Y242 345 aa4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 FOXA2Q9Y261 457 aaPredicted RBP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TDRKHQ9Y2W6 561 aaKnown RBP4.87□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM129A0AVI4 362 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 BICDL2A1A5D9 508 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 SYCE3A1L190 88 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 CYSRT1A8MQ03 144 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF732B4DXR9 585 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 SGK1O00141 431 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 CYB561D2O14569 222 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 KHDRBS3O75525 346 aaKnown RBP4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 RHOBTB1O94844 696 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 FGF19O95750 216 aa4.86□□□□□ -1.63
RNU4-39P-201ENST00000362455 PIGRP01833 764 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms