RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 AP1S2P56377 157 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 RPL6Q02878 288 aaKnown RBP14.07□□□□□ -0.16
UBAP1-202ENST00000359544 CRYZQ08257 329 aaKnown RBP14.07□□□□□ -0.16
UBAP1-202ENST00000359544 DSC1Q08554 894 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 TUSC3Q13454 348 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 PUM1Q14671 1186 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBAP1-202ENST00000359544 TUSC1Q2TAM9 212 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ARMC12Q5T9G4 340 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 SLC36A4Q6YBV0 504 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 TMEM91Q6ZNR0 172 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 RRM2BQ7LG56 351 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 KRT74Q7RTS7 529 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 KIAA0907Q7Z7F0 614 aaPredicted RBP14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ADGRG2Q8IZP9 1017 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 NXPE1Q8N323 547 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 OR8D4Q8NGM9 314 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 UQCC2Q9BRT2 126 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 TMED9Q9BVK6 235 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 REEP4Q9H6H4 257 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 PRM3Q9NNZ6 103 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 IL26Q9NPH9 171 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 CD93Q9NPY3 652 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 BRWD1Q9NSI6 2320 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 SLC16A5O15375 505 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 SLC28A2O43868 658 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 SLC34A2O95436 690 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 NAT2P11245 290 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 GALP22466 123 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 TIA1P31483 386 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ZNF385BQ569K4 471 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 NHLRC3Q5JS37 347 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 REEP3Q6NUK4 255 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 FTMTQ8N4E7 242 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 CELF5Q8N6W0 485 aaKnown RBP14.07□□□□□ -0.16
UBAP1-202ENST00000359544 OR4K1Q8NGD4 311 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ZNF416Q9BWM5 594 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 TBC1D17Q9HA65 648 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ASB6Q9NWX5 421 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 EMC3Q9P0I2 261 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ACSL6Q9UKU0 697 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 LOC105369274A0A096LPK9 316 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 EEF1E1O43324 174 aaKnown RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 SSNA1O43805 119 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 UGT2B7P16662 529 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 RPL3P39023 403 aaKnown RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 GINS1Q14691 196 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 CHRNA6Q15825 494 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 MINDY4Q4G0A6 757 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 IKBIPQ70UQ0 350 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 OR4N4Q8N0Y3 316 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 ZFP41Q8N8Y5 198 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 APOBEC4Q8WW27 367 aaKnown RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 GIMAP1Q8WWP7 306 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 ASB11Q8WXH4 323 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 SCRN2Q96FV2 425 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 GPR62Q9BZJ7 368 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 ACTR6Q9GZN1 396 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 POMT2Q9UKY4 750 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 NPTNQ9Y639 398 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 MTMR11A4FU01 709 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 H0YIV9 168 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 CACNB4O00305 520 aaPredicted RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 TP53P04637 393 aaPredicted RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 PROS1P07225 676 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 MPC1LP0DKB6 136 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 HOXB1P14653 301 aaPredicted RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 CD22P20273 847 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 SPAM1P38567 509 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 MTNR1AP48039 350 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 SMSP52788 366 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 C2orf80Q0P641 193 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 OPCMLQ14982 345 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 IDNKQ5T6J7 187 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 GRHL2Q6ISB3 625 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 PYHIN1Q6K0P9 492 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 CD300LDQ6UXZ3 194 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 WASH2PQ6VEQ5 465 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 OR2T35Q8NGX2 323 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 SLC38A2Q96QD8 506 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 WASH6PQ9NQA3 447 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 PCDHB16Q9NRJ7 776 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 PFDN2Q9UHV9 154 aa14.06□□□□□ -0.16
UBAP1-202ENST00000359544 PPIEQ9UNP9 301 aaKnown RBP14.06□□□□□ -0.16
UBAP1-202ENST00000359544 C5orf58C9J3I9 102 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 PRRG1O14668 218 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 GPR37L1O60883 481 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 NME6O75414 186 aaPredicted RBP14.05□□□□□ -0.16
UBAP1-202ENST00000359544 H2AFB2P0C5Z0 115 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 LIMS3P0CW19 117 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 LIMS4P0CW20 117 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 CCR7P32248 378 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 SLC11A2P49281 568 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 MTNR1BP49286 362 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 VSX2P58304 361 aaPredicted RBP14.05□□□□□ -0.16
UBAP1-202ENST00000359544 PFN3P60673 137 aa14.05□□□□□ -0.16
UBAP1-202ENST00000359544 ACSM1Q08AH1 577 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms